Gene name: AVT3
Reference locus (S288C): YKL146W
Gene biotype: protein_coding
Description: Vacuolar transporter; exports large neutral amino acids from the vacuole; member of a family of seven S. cerevisiae genes (AVT1-7) related to vesicular GABA-glycine transporters
Top 10 interactors (score): ATG22 (0.972); AVT6 (0.941); AVT7 (0.935); AVT4 (0.871); VBA3 (0.769); VBA2 (0.765); ATG15 (0.759); VBA1 (0.731); YHC3 (0.699); FAB1 (0.604); AVT1 (0.574); YPQ1 (0.554); SGE1 (0.547); ERS1 (0.5); RER2 (0.481); TRP5 (0.465); AVT5 (0.456); PRB1 (0.448); PHO8 (0.405); PTR2 (0.405)
Homologues (species, bitscore): SLC36A1 (Homo sapiens, 129.4); Slc36a2 (Mus musculus, 122.5); slc36a1 (Danio rerio, 129.4); slc36a4 (Xenopus tropicalis, 124.4); CG13384 (Drosophila melanogaster, 127.9); Y43F4B.7 (Caenorhabditis elegans, 114.0); AT5G65990 (Arabidopsis thaliana, 129.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:158657-160735:+ | gene-YKL146W_AKU4011 | rna-NM_001179712.1_AKU4011 | cds-NP_012776.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000030.1:135791-137869:+ | gene-YKL146W_BG1 | rna-NM_001179712.1_BG1 | cds-NP_012776.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:176320-178398:+ | gene-YKL146W_Bruggeman | rna-NM_001179712.1_Bruggeman | cds-NP_012776.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:171645-173723:+ | gene-YKL146W_CAT1 | rna-NM_001179712.1_CAT1 | cds-NP_012776.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:170888-172966:+ | gene-YKL146W_CBS1585 | rna-NM_001179712.1_CBS1585 | cds-NP_012776.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:169492-171570:+ | gene-YKL146W_CBS436 | rna-NM_001179712.1_CBS436 | cds-NP_012776.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:155902-157980:+ | gene-YKL146W_CBS6412 | rna-NM_001179712.1_CBS6412 | cds-NP_012776.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:171352-173430:+ | gene-YKL146W_CBS6413 | rna-NM_001179712.1_CBS6413 | cds-NP_012776.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:171427-173505:+ | gene-YKL146W_CENPK1137D | rna-NM_001179712.1_CENPK1137D | cds-NP_012776.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:169391-171469:+ | gene-YKL146W_EthanolRed | rna-NM_001179712.1_EthanolRed | cds-NP_012776.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:170203-172281:+ | gene-YKL146W_FaliES1 | rna-NM_001179712.1_FaliES1 | cds-NP_012776.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000198.1:6918-8996:+ | gene-YKL146W_JAY291 | rna-NM_001179712.1_JAY291 | cds-NP_012776.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:178417-180495:+ | gene-YKL146W_MUCL30387 | rna-NM_001179712.1_MUCL30387 | cds-NP_012776.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:172769-174847:+ | gene-YKL146W_MUCL30388 | rna-NM_001179712.1_MUCL30388 | cds-NP_012776.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:170689-172767:+ | gene-YKL146W_MUCL39482 | rna-NM_001179712.1_MUCL39482 | cds-NP_012776.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:175082-177160:+ | gene-YKL146W_MUCL42920 | rna-NM_001179712.1_MUCL42920 | cds-NP_012776.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:171772-173850:+ | gene-YKL146W_NCIM3186 | rna-NM_001179712.1_NCIM3186 | cds-NP_012776.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:170879-172957:+ | gene-YKL146W_NCYC1407 | rna-NM_001179712.1_NCYC1407 | cds-NP_012776.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:177980-180058:+ | gene-YKL146W_PE2H3 | rna-NM_001179712.1_PE2H3 | cds-NP_012776.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:174274-176352:+ | gene-YKL146W_PE2H4 | rna-NM_001179712.1_PE2H4 | cds-NP_012776.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:171783-173861:+ | gene-YKL146W_S288C | rna-NM_001179712.1_S288C | cds-NP_012776.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000008.1:88205-90283:+ | gene-YKL146W_SA1 | rna-NM_001179712.1_SA1 | cds-NP_012776.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:170903-172981:+ | gene-YKL146W_ThermosaccDry | rna-NM_001179712.1_ThermosaccDry | cds-NP_012776.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:170256-172334:+ | gene-YKL146W_VR1 | rna-NM_001179712.1_VR1 | cds-NP_012776.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:169438-171516:+ | gene-YKL146W_ZTW1 | rna-NM_001179712.1_ZTW1 | cds-NP_012776.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:186126-188213:+ | gene-YKL146W_Sparadoxus | rna-NM_001179712.1_Sparadoxus | cds-NP_012776.1_Sparadoxus | 89.6 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |