AUS1 (YOR011W)


Gene profile

Gene name: AUS1
Reference locus (S288C): YOR011W
Gene biotype: protein_coding

Description: Atp-binding cassette, subfamily g (white), member 2, snq2; ATP-dependent permease AUS1; Plasma membrane sterol transporter of the ATP-binding cassette family; required, along with Pdr11p, for uptake of exogenous sterols and their incorporation into the plasma membrane; activity is stimulated by phosphatidylserine; sterol uptake is required for anaerobic growth because sterol biosynthesis requires oxygen; AUS1 has a paralog, PDR11, that arose from the whole genome duplication

Top 10 interactors (score): TIR4 (0.948); DAN1 (0.866); UPC2 (0.843); NPC2 (0.813); TIR3 (0.785); YOR1 (0.736); URN1 (0.698); YBT1 (0.697); ARE2 (0.692); PDR11 (0.683); NFT1 (0.644); PAU24 (0.628); YCF1 (0.607); DET1 (0.573); ECM22 (0.571); HEM13 (0.571); HES1 (0.567); WWM1 (0.563); PAU7 (0.562); VMR1 (0.558)

Homologues (species, bitscore): ABCG2 (Homo sapiens, 170.6); Abcg2 (Mus musculus, 166.4); abcg2a (Danio rerio, 166.8); abcg2 (Xenopus tropicalis, 180.3); CG9664 (Drosophila melanogaster, 176.8); wht-8 (Caenorhabditis elegans, 152.1); ABCG31 (Arabidopsis thaliana, 347.1)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:333899-338083:+ gene-YOR011W_AKU4011 rna-NM_001183430.1_AKU4011 cds-NP_014654.1_AKU4011 99.6 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000152.1:149476-153660:+ gene-YOR011W_BG1 rna-NM_001183430.1_BG1 cds-NP_014654.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:336636-340820:+ gene-YOR011W_Bruggeman rna-NM_001183430.1_Bruggeman cds-NP_014654.1_Bruggeman 99.4 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:334762-338946:+ gene-YOR011W_CAT1 rna-NM_001183430.1_CAT1 cds-NP_014654.1_CAT1 99.6 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:328589-332773:+ gene-YOR011W_CBS1585 rna-NM_001183430.1_CBS1585 cds-NP_014654.1_CBS1585 99.6 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005357.1:332947-337131:+ gene-YOR011W_CBS436 rna-NM_001183430.1_CBS436 cds-NP_014654.1_CBS436 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005341.1:327942-332126:+ gene-YOR011W_CBS6412 rna-NM_001183430.1_CBS6412 cds-NP_014654.1_CBS6412 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:335315-339499:+ gene-YOR011W_CBS6413 rna-NM_001183430.1_CBS6413 cds-NP_014654.1_CBS6413 99.6 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:349435-353619:+ gene-YOR011W_CENPK1137D rna-NM_001183430.1_CENPK1137D cds-NP_014654.1_CENPK1137D 99.5 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005485.1:330598-334782:+ gene-YOR011W_EthanolRed rna-NM_001183430.1_EthanolRed cds-NP_014654.1_EthanolRed 99.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:333947-338131:+ gene-YOR011W_FaliES1 rna-NM_001183430.1_FaliES1 cds-NP_014654.1_FaliES1 99.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000035.1:4593-8777:+ gene-YOR011W_JAY291 rna-NM_001183430.1_JAY291 cds-NP_014654.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:341027-345211:+ gene-YOR011W_MUCL30387 rna-NM_001183430.1_MUCL30387 cds-NP_014654.1_MUCL30387 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:344462-348646:+ gene-YOR011W_MUCL30388 rna-NM_001183430.1_MUCL30388 cds-NP_014654.1_MUCL30388 99.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:336072-340256:+ gene-YOR011W_MUCL39482 rna-NM_001183430.1_MUCL39482 cds-NP_014654.1_MUCL39482 99.6 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:350876-355060:+ gene-YOR011W_MUCL42920 rna-NM_001183430.1_MUCL42920 cds-NP_014654.1_MUCL42920 99.4 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:349568-353752:+ gene-YOR011W_NCIM3186 rna-NM_001183430.1_NCIM3186 cds-NP_014654.1_NCIM3186 92.8 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:342772-346956:+ gene-YOR011W_NCYC1407 rna-NM_001183430.1_NCYC1407 cds-NP_014654.1_NCYC1407 99.6 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:341612-345796:+ gene-YOR011W_PE2H3 rna-NM_001183430.1_PE2H3 cds-NP_014654.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:351991-356175:+ gene-YOR011W_PE2H4 rna-NM_001183430.1_PE2H4 cds-NP_014654.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:349679-353863:+ gene-YOR011W_S288C rna-NM_001183430.1_S288C cds-NP_014654.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000001.1:317446-321630:+ gene-YOR011W_SA1 rna-NM_001183430.1_SA1 cds-NP_014654.1_SA1 99.6 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:332486-336670:+ gene-YOR011W_ThermosaccDry rna-NM_001183430.1_ThermosaccDry cds-NP_014654.1_ThermosaccDry 99.6 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:333384-337568:+ gene-YOR011W_VR1 rna-NM_001183430.1_VR1 cds-NP_014654.1_VR1 99.5 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000032.1:67113-71297:+ gene-YOR011W_ZTW1 rna-NM_001183430.1_ZTW1 cds-NP_014654.1_ZTW1 99.6 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:340977-345161:+ gene-YOR011W_Sparadoxus rna-NM_001183430.1_Sparadoxus cds-NP_014654.1_Sparadoxus 91.6 100.0 Verified 1 1 1 False True False False False

Additional files