Gene name: ATR2
Reference locus (S288C): YMR279C
Gene biotype: protein_coding
Description: Mfs transporter, dha2 family, multidrug resistance protein; Uncharacterized transporter YMR279C; Putative boron transporter involved in boron efflux and resistance; overexpression mutant but not null mutant displays boron tolerance phenotype; identified as a heat-induced gene in a high-throughout screen; YMR279C is not an essential gene; YMR279C has a paralog, ATR1, that arose from the whole genome duplication
Top 10 interactors (score): VBA3 (0.895); SGE1 (0.877); VBA5 (0.875); AZR1 (0.872); VBA1 (0.858); VBA4 (0.815); GEX2 (0.813); HOL1 (0.748); GEX1 (0.746); OAF1 (0.718); ENB1 (0.697); ARN2 (0.651); QDR3 (0.617); ARN1 (0.591); SIT1 (0.573); AQR1 (0.567); FLR1 (0.523); MIG3 (0.499); VBA2 (0.464); YMR155W (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:863793-865415:- | gene-YMR279C_AKU4011 | rna-NM_001182786.1_AKU4011 | cds-NP_014006.1_AKU4011 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:88270-89892:+ | gene-YMR279C_BG1 | rna-NM_001182786.1_BG1 | cds-NP_014006.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:809002-810624:- | gene-YMR279C_Bruggeman | rna-NM_001182786.1_Bruggeman | cds-NP_014006.1_Bruggeman | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:812288-813910:- | gene-YMR279C_CAT1 | rna-NM_001182786.1_CAT1 | cds-NP_014006.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:796043-797665:- | gene-YMR279C_CBS1585 | rna-NM_001182786.1_CBS1585 | cds-NP_014006.1_CBS1585 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:818346-819968:- | gene-YMR279C_CBS436 | rna-NM_001182786.1_CBS436 | cds-NP_014006.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:907617-909239:- | gene-YMR279C_CBS6412 | rna-NM_001182786.1_CBS6412 | cds-NP_014006.1_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:795164-796786:- | gene-YMR279C_CBS6413 | rna-NM_001182786.1_CBS6413 | cds-NP_014006.1_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:819287-820909:- | gene-YMR279C_CENPK1137D | rna-NM_001182786.1_CENPK1137D | cds-NP_014006.1_CENPK1137D | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:856482-858104:- | gene-YMR279C_EthanolRed | rna-NM_001182786.1_EthanolRed | cds-NP_014006.1_EthanolRed | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:802509-804131:- | gene-YMR279C_FaliES1 | rna-NM_001182786.1_FaliES1 | cds-NP_014006.1_FaliES1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000262.1:47616-49238:+ | gene-YMR279C_JAY291 | rna-NM_001182786.1_JAY291 | cds-NP_014006.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:802827-804449:- | gene-YMR279C_MUCL30387 | rna-NM_001182786.1_MUCL30387 | cds-NP_014006.1_MUCL30387 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:812224-813846:- | gene-YMR279C_MUCL30388 | rna-NM_001182786.1_MUCL30388 | cds-NP_014006.1_MUCL30388 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:797131-798753:- | gene-YMR279C_MUCL39482 | rna-NM_001182786.1_MUCL39482 | cds-NP_014006.1_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:805198-806820:- | gene-YMR279C_MUCL42920 | rna-NM_001182786.1_MUCL42920 | cds-NP_014006.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:824683-826305:- | gene-YMR279C_NCIM3186 | rna-NM_001182786.1_NCIM3186 | cds-NP_014006.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:796774-798396:- | gene-YMR279C_NCYC1407 | rna-NM_001182786.1_NCYC1407 | cds-NP_014006.1_NCYC1407 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:812564-814186:- | gene-YMR279C_PE2H3 | rna-NM_001182786.1_PE2H3 | cds-NP_014006.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:808541-810163:- | gene-YMR279C_PE2H4 | rna-NM_001182786.1_PE2H4 | cds-NP_014006.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:824729-826351:- | gene-YMR279C_S288C | rna-NM_001182786.1_S288C | cds-NP_014006.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000036.1:2153-3775:- | gene-YMR279C_SA1 | rna-NM_001182786.1_SA1 | cds-NP_014006.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:798678-800300:- | gene-YMR279C_ThermosaccDry | rna-NM_001182786.1_ThermosaccDry | cds-NP_014006.1_ThermosaccDry | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:811914-813536:- | gene-YMR279C_VR1 | rna-NM_001182786.1_VR1 | cds-NP_014006.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000028.1:213912-215534:- | gene-YMR279C_ZTW1 | rna-NM_001182786.1_ZTW1 | cds-NP_014006.1_ZTW1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:817115-818737:- | gene-YMR279C_Sparadoxus | rna-NM_001182786.1_Sparadoxus | cds-NP_014006.1_Sparadoxus | 90.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |