Gene name: ATR1
Reference locus (S288C): YML116W
Gene biotype: protein_coding
Description: Aminotriazole resistance protein; Multidrug efflux pump of the major facilitator superfamily; required for resistance to aminotriazole and 4-nitroquinoline-N-oxide; ATR1 has a paralog, YMR279C, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress
Top 10 interactors (score): FLR1 (0.913); AZR1 (0.795); VBA3 (0.791); SGE1 (0.771); VBA5 (0.768); PDR5 (0.758); YAP1 (0.716); TPO1 (0.713); SNQ2 (0.704); HOL1 (0.698); TPO4 (0.696); QDR1 (0.691); YOR1 (0.682); AQR1 (0.672); YCR102C (0.655); GEX2 (0.65); VBA4 (0.62); GEX1 (0.617); GCN4 (0.592); YLR460C (0.59)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:31896-33524:+ | gene-YML116W_AKU4011 | rna-NM_001182478.1_AKU4011 | cds-NP_013591.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:442646-444274:- | gene-YML116W_BG1 | rna-NM_001182478.1_BG1 | cds-NP_013591.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:38158-39786:+ | gene-YML116W_Bruggeman | rna-NM_001182478.1_Bruggeman | cds-NP_013591.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:39717-41345:+ | gene-YML116W_CAT1 | rna-NM_001182478.1_CAT1 | cds-NP_013591.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:31895-33523:+ | gene-YML116W_CBS1585 | rna-NM_001182478.1_CBS1585 | cds-NP_013591.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:37915-39543:+ | gene-YML116W_CBS436 | rna-NM_001182478.1_CBS436 | cds-NP_013591.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:32658-34286:+ | gene-YML116W_CBS6412 | rna-NM_001182478.1_CBS6412 | cds-NP_013591.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:31122-32750:+ | gene-YML116W_CBS6413 | rna-NM_001182478.1_CBS6413 | cds-NP_013591.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:32711-34339:+ | gene-YML116W_CENPK1137D | rna-NM_001182478.1_CENPK1137D | cds-NP_013591.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:32411-34039:+ | gene-YML116W_EthanolRed | rna-NM_001182478.1_EthanolRed | cds-NP_013591.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:32688-34316:+ | gene-YML116W_FaliES1 | rna-NM_001182478.1_FaliES1 | cds-NP_013591.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000345.1:55869-57497:- | gene-YML116W_JAY291 | rna-NM_001182478.1_JAY291 | cds-NP_013591.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:36636-38264:+ | gene-YML116W_MUCL30387 | rna-NM_001182478.1_MUCL30387 | cds-NP_013591.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:39852-41480:+ | gene-YML116W_MUCL30388 | rna-NM_001182478.1_MUCL30388 | cds-NP_013591.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:31910-33538:+ | gene-YML116W_MUCL39482 | rna-NM_001182478.1_MUCL39482 | cds-NP_013591.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:36078-37706:+ | gene-YML116W_MUCL42920 | rna-NM_001182478.1_MUCL42920 | cds-NP_013591.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:38150-39778:+ | gene-YML116W_NCIM3186 | rna-NM_001182478.1_NCIM3186 | cds-NP_013591.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:32705-34333:+ | gene-YML116W_NCYC1407 | rna-NM_001182478.1_NCYC1407 | cds-NP_013591.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:38145-39773:+ | gene-YML116W_PE2H3 | rna-NM_001182478.1_PE2H3 | cds-NP_013591.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:38083-39711:+ | gene-YML116W_PE2H4 | rna-NM_001182478.1_PE2H4 | cds-NP_013591.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:38196-39824:+ | gene-YML116W_S288C | rna-NM_001182478.1_S288C | cds-NP_013591.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000054.1:30142-31770:+ | gene-YML116W_SA1 | rna-NM_001182478.1_SA1 | cds-NP_013591.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:31986-33614:+ | gene-YML116W_ThermosaccDry | rna-NM_001182478.1_ThermosaccDry | cds-NP_013591.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:36387-38015:+ | gene-YML116W_VR1 | rna-NM_001182478.1_VR1 | cds-NP_013591.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:11468-13096:+ | gene-YML116W_ZTW1 | rna-NM_001182478.1_ZTW1 | cds-NP_013591.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:42990-44627:+ | gene-YML116W_Sparadoxus | rna-NM_001182478.1_Sparadoxus | cds-NP_013591.1_Sparadoxus | 89.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |