ATP10 (YLR393W)


Gene profile

Gene name: ATP10
Reference locus (S288C): YLR393W
Gene biotype: protein_coding

Description: Mitochondrial ATPase complex subunit ATP10; Assembly factor for the F0 sector of mitochondrial F1F0 ATP synthase; mitochondrial inner membrane protein; interacts genetically with ATP6; Belongs to the ATP10 family

Top 10 interactors (score): ATP6 (0.969); ATP23 (0.927); ATP4 (0.913); YGR017W (0.888); ATP7 (0.883); OLI1 (0.862); INA22 (0.862); ATP12 (0.861); ATP11 (0.859); ATP5 (0.852); INA17 (0.845); ATP8 (0.798); OXA1 (0.78); FMC1 (0.751); ATP25 (0.746); ATP22 (0.745); ATP2 (0.683); RCM1 (0.677); MSS51 (0.673); ATP16 (0.642)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005306.1:856615-857454:+ gene-YLR393W_AKU4011 rna-NM_001182281.1_AKU4011 cds-NP_013497.1_AKU4011 100.0 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000048.1:88761-89600:+ gene-YLR393W_BG1 rna-NM_001182281.1_BG1 cds-NP_013497.1_BG1 99.8 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005514.1:894920-895759:+ gene-YLR393W_Bruggeman rna-NM_001182281.1_Bruggeman cds-NP_013497.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005530.1:890447-891286:+ gene-YLR393W_CAT1 rna-NM_001182281.1_CAT1 cds-NP_013497.1_CAT1 99.8 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005370.1:892211-893050:+ gene-YLR393W_CBS1585 rna-NM_001182281.1_CBS1585 cds-NP_013497.1_CBS1585 100.0 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005354.1:875852-876691:+ gene-YLR393W_CBS436 rna-NM_001182281.1_CBS436 cds-NP_013497.1_CBS436 99.8 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005338.1:928252-929091:+ gene-YLR393W_CBS6412 rna-NM_001182281.1_CBS6412 cds-NP_013497.1_CBS6412 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005322.1:892502-893341:+ gene-YLR393W_CBS6413 rna-NM_001182281.1_CBS6413 cds-NP_013497.1_CBS6413 100.0 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001533.1:891890-892729:+ gene-YLR393W_CENPK1137D rna-NM_001182281.1_CENPK1137D cds-NP_013497.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005482.1:849158-849997:+ gene-YLR393W_EthanolRed rna-NM_001182281.1_EthanolRed cds-NP_013497.1_EthanolRed 99.7 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005546.1:878468-879307:+ gene-YLR393W_FaliES1 rna-NM_001182281.1_FaliES1 cds-NP_013497.1_FaliES1 99.7 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000434.1:31625-32464:+ gene-YLR393W_JAY291 rna-NM_001182281.1_JAY291 cds-NP_013497.1_JAY291 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005418.1:893786-894625:+ gene-YLR393W_MUCL30387 rna-NM_001182281.1_MUCL30387 cds-NP_013497.1_MUCL30387 99.8 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005450.1:899872-900711:+ gene-YLR393W_MUCL30388 rna-NM_001182281.1_MUCL30388 cds-NP_013497.1_MUCL30388 99.8 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005290.1:893431-894270:+ gene-YLR393W_MUCL39482 rna-NM_001182281.1_MUCL39482 cds-NP_013497.1_MUCL39482 100.0 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005434.1:888087-888926:+ gene-YLR393W_MUCL42920 rna-NM_001182281.1_MUCL42920 cds-NP_013497.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011821.1:907053-907892:+ gene-YLR393W_NCIM3186 rna-NM_001182281.1_NCIM3186 cds-NP_013497.1_NCIM3186 100.0 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005274.1:902611-903450:+ gene-YLR393W_NCYC1407 rna-NM_001182281.1_NCYC1407 cds-NP_013497.1_NCYC1407 100.0 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994151.1:889005-889844:+ gene-YLR393W_PE2H3 rna-NM_001182281.1_PE2H3 cds-NP_013497.1_PE2H3 99.7 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999883.1:888749-889588:+ gene-YLR393W_PE2H4 rna-NM_001182281.1_PE2H4 cds-NP_013497.1_PE2H4 99.7 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:907079-907918:+ gene-YLR393W_S288C rna-NM_001182281.1_S288C cds-NP_013497.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000007.1:140770-141609:- gene-YLR393W_SA1 rna-NM_001182281.1_SA1 cds-NP_013497.1_SA1 99.7 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005498.1:881547-882386:+ gene-YLR393W_ThermosaccDry rna-NM_001182281.1_ThermosaccDry cds-NP_013497.1_ThermosaccDry 100.0 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005466.1:894095-894934:+ gene-YLR393W_VR1 rna-NM_001182281.1_VR1 cds-NP_013497.1_VR1 99.7 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000025.1:218263-219102:+ gene-YLR393W_ZTW1 rna-NM_001182281.1_ZTW1 cds-NP_013497.1_ZTW1 100.0 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047498.1:866937-867776:+ gene-YLR393W_Sparadoxus rna-NM_001182281.1_Sparadoxus cds-NP_013497.1_Sparadoxus 89.2 100.0 Verified 1 1 1 False True False False False

Additional files