Gene name: ATH1
Reference locus (S288C): YPR026W
Gene biotype: protein_coding
Description: Alpha,alpha-trehalase ath1; Acid trehalase required for utilization of extracellular trehalose; involved in intracellular trehalose degradation during growth recovery after saline stress
Top 10 interactors (score): NTH1 (0.996); NTH2 (0.995); TPS3 (0.978); TPS2 (0.956); TSL1 (0.953); ATC1 (0.894); GDB1 (0.871); PGM2 (0.823); GPH1 (0.808); UIP4 (0.758); OM45 (0.725); GLC3 (0.657); DCS2 (0.656); TFS1 (0.652); MSC1 (0.639); GAD1 (0.633); TPS1 (0.627); YLR149C (0.617); PFK26 (0.609); SOL4 (0.609)
Homologues (species, bitscore): ATHL1 (Homo sapiens, 159.8); Athl1 (Mus musculus, 164.5); athl1 (Danio rerio, 172.9); pgghg (Xenopus tropicalis, 179.1); CG16965 (Drosophila melanogaster, 158.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:587017-590652:+ | gene-YPR026W_AKU4011 | rna-NM_001184123.1_AKU4011 | cds-NP_015351.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:306496-310131:- | gene-YPR026W_BG1 | rna-NM_001184123.1_BG1 | cds-NP_015351.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:664676-668311:+ | gene-YPR026W_Bruggeman | rna-NM_001184123.1_Bruggeman | cds-NP_015351.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:708158-711793:+ | gene-YPR026W_CAT1 | rna-NM_001184123.1_CAT1 | cds-NP_015351.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:590701-594336:+ | gene-YPR026W_CBS1585 | rna-NM_001184123.1_CBS1585 | cds-NP_015351.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:605088-608723:+ | gene-YPR026W_CBS436 | rna-NM_001184123.1_CBS436 | cds-NP_015351.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:594450-598085:+ | gene-YPR026W_CBS6412 | rna-NM_001184123.1_CBS6412 | cds-NP_015351.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:587166-590801:+ | gene-YPR026W_CBS6413 | rna-NM_001184123.1_CBS6413 | cds-NP_015351.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:615353-618988:+ | gene-YPR026W_CENPK1137D | rna-NM_001184123.1_CENPK1137D | cds-NP_015351.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:584951-588586:+ | gene-YPR026W_EthanolRed | rna-NM_001184123.1_EthanolRed | cds-NP_015351.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:592753-596388:+ | gene-YPR026W_FaliES1 | rna-NM_001184123.1_FaliES1 | cds-NP_015351.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000116.1:31032-34667:- | gene-YPR026W_JAY291 | rna-NM_001184123.1_JAY291 | cds-NP_015351.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:605896-609531:+ | gene-YPR026W_MUCL30387 | rna-NM_001184123.1_MUCL30387 | cds-NP_015351.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:604560-608195:+ | gene-YPR026W_MUCL30388 | rna-NM_001184123.1_MUCL30388 | cds-NP_015351.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:583958-587593:+ | gene-YPR026W_MUCL39482 | rna-NM_001184123.1_MUCL39482 | cds-NP_015351.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:645273-648908:+ | gene-YPR026W_MUCL42920 | rna-NM_001184123.1_MUCL42920 | cds-NP_015351.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:615362-618997:+ | gene-YPR026W_NCIM3186 | rna-NM_001184123.1_NCIM3186 | cds-NP_015351.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:591890-595525:+ | gene-YPR026W_NCYC1407 | rna-NM_001184123.1_NCYC1407 | cds-NP_015351.1_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:598607-602242:+ | gene-YPR026W_PE2H3 | rna-NM_001184123.1_PE2H3 | cds-NP_015351.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:598255-601890:+ | gene-YPR026W_PE2H4 | rna-NM_001184123.1_PE2H4 | cds-NP_015351.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:615379-619014:+ | gene-YPR026W_S288C | rna-NM_001184123.1_S288C | cds-NP_015351.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000026.1:81284-84919:- | gene-YPR026W_SA1 | rna-NM_001184123.1_SA1 | cds-NP_015351.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:592554-596189:+ | gene-YPR026W_ThermosaccDry | rna-NM_001184123.1_ThermosaccDry | cds-NP_015351.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:608802-612437:+ | gene-YPR026W_VR1 | rna-NM_001184123.1_VR1 | cds-NP_015351.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:591858-595493:+ | gene-YPR026W_ZTW1 | rna-NM_001184123.1_ZTW1 | cds-NP_015351.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:592095-595730:+ | gene-YPR026W_Sparadoxus | rna-NM_001184123.1_Sparadoxus | cds-NP_015351.1_Sparadoxus | 90.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |