Gene name: ATG9
Reference locus (S288C): YDL149W
Gene biotype: protein_coding
Description: Autophagy-related protein 9; Transmembrane protein involved in forming Cvt and autophagic vesicles; cycles between the phagophore assembly site (PAS) and other cytosolic punctate structures, not found in autophagosomes; may be involved in membrane delivery to the PAS; Belongs to the ATG9 family
Top 10 interactors (score): ATG18 (0.999); VPS34 (0.999); VPS30 (0.999); ATG11 (0.999); ATG1 (0.999); ATG13 (0.999); VPS15 (0.999); ATG2 (0.999); ATG7 (0.998); ATG27 (0.998); ATG8 (0.997); ATG23 (0.997); ATG12 (0.997); ATG5 (0.996); ATG3 (0.994); ATG17 (0.994); ATG4 (0.993); ATG21 (0.989); ATG29 (0.986); ATG31 (0.985)
Homologues (species, bitscore): ATG9A (Homo sapiens, 232.6); Atg9a (Mus musculus, 231.9); atg9a (Danio rerio, 243.8); atg9b (Xenopus tropicalis, 258.8); Atg9 (Drosophila melanogaster, 212.6); atg-9 (Caenorhabditis elegans, 186.0); APG9 (Arabidopsis thaliana, 268.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:169342-172335:+ | gene-YDL149W_AKU4011 | rna-NM_001180209.1_AKU4011 | cds-NP_010132.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:377447-380440:- | gene-YDL149W_BG1 | rna-NM_001180209.1_BG1 | cds-NP_010132.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:185386-188379:+ | gene-YDL149W_Bruggeman | rna-NM_001180209.1_Bruggeman | cds-NP_010132.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:183705-186698:+ | gene-YDL149W_CAT1 | rna-NM_001180209.1_CAT1 | cds-NP_010132.1_CAT1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:167373-170366:+ | gene-YDL149W_CBS1585 | rna-NM_001180209.1_CBS1585 | cds-NP_010132.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:184311-187304:+ | gene-YDL149W_CBS436 | rna-NM_001180209.1_CBS436 | cds-NP_010132.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:166626-169619:+ | gene-YDL149W_CBS6412 | rna-NM_001180209.1_CBS6412 | cds-NP_010132.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:185811-188804:+ | gene-YDL149W_CBS6413 | rna-NM_001180209.1_CBS6413 | cds-NP_010132.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:183577-186570:+ | gene-YDL149W_CENPK1137D | rna-NM_001180209.1_CENPK1137D | cds-NP_010132.1_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:180581-183574:+ | gene-YDL149W_EthanolRed | rna-NM_001180209.1_EthanolRed | cds-NP_010132.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:186113-189106:+ | gene-YDL149W_FaliES1 | rna-NM_001180209.1_FaliES1 | cds-NP_010132.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000032.1:30446-33439:- | gene-YDL149W_JAY291 | rna-NM_001180209.1_JAY291 | cds-NP_010132.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:184500-187493:+ | gene-YDL149W_MUCL30387 | rna-NM_001180209.1_MUCL30387 | cds-NP_010132.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:175361-178354:+ | gene-YDL149W_MUCL30388 | rna-NM_001180209.1_MUCL30388 | cds-NP_010132.1_MUCL30388 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:168528-171521:+ | gene-YDL149W_MUCL39482 | rna-NM_001180209.1_MUCL39482 | cds-NP_010132.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | MBVV01000205.1:30415-32995:- | gene-YDL149W_MUCL42920 | rna-NM_001180209.1_MUCL42920 | cds-NP_010132.1_MUCL42920 | 85.8 | 86.2 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:184848-187841:+ | gene-YDL149W_NCIM3186 | rna-NM_001180209.1_NCIM3186 | cds-NP_010132.1_NCIM3186 | 97.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:168464-171457:+ | gene-YDL149W_NCYC1407 | rna-NM_001180209.1_NCYC1407 | cds-NP_010132.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:175699-178692:+ | gene-YDL149W_PE2H3 | rna-NM_001180209.1_PE2H3 | cds-NP_010132.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:175703-178696:+ | gene-YDL149W_PE2H4 | rna-NM_001180209.1_PE2H4 | cds-NP_010132.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:184925-187918:+ | gene-YDL149W_S288C | rna-NM_001180209.1_S288C | cds-NP_010132.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000043.1:50482-53475:+ | gene-YDL149W_SA1 | rna-NM_001180209.1_SA1 | cds-NP_010132.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:185874-188867:+ | gene-YDL149W_ThermosaccDry | rna-NM_001180209.1_ThermosaccDry | cds-NP_010132.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:186468-189461:+ | gene-YDL149W_VR1 | rna-NM_001180209.1_VR1 | cds-NP_010132.1_VR1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:184001-186994:+ | gene-YDL149W_ZTW1 | rna-NM_001180209.1_ZTW1 | cds-NP_010132.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:186155-189130:+ | gene-YDL149W_Sparadoxus | rna-NM_001180209.1_Sparadoxus | cds-NP_010132.1_Sparadoxus | 88.0 | 99.2 | Verified | 1 | 1 | 1 | False | True | False | False | False |