Gene name: ATG36
Reference locus (S288C): YJL185C
Gene biotype: protein_coding
Description: Autophagy-related protein 36; Pex3p interacting protein, required for pexophagy; interacts with Atg8p and Atg11p; mRNA is weakly cell cycle regulated, peaking in G2 phase; YJL185C is a non-essential gene
Top 10 interactors (score): ATG11 (0.995); ATG8 (0.989); PEX3 (0.97); ATG32 (0.918); ATG19 (0.91); ATG34 (0.903); ATG39 (0.875); ATG40 (0.85); HRR25 (0.843); DNM1 (0.835); VPS1 (0.828); PEX11 (0.778); ATG1 (0.767); PEX6 (0.758); CUE5 (0.747); ATG9 (0.746); ATG38 (0.745); ATG33 (0.737); ATG31 (0.716); PEX5 (0.714)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:70488-71369:- | gene-YJL185C_AKU4011 | rna-NM_001181618.1_AKU4011 | cds-NP_012350.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000181.1:47816-48697:- | gene-YJL185C_BG1 | rna-NM_001181618.1_BG1 | cds-NP_012350.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:82319-83200:- | gene-YJL185C_Bruggeman | rna-NM_001181618.1_Bruggeman | cds-NP_012350.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:85788-86669:- | gene-YJL185C_CAT1 | rna-NM_001181618.1_CAT1 | cds-NP_012350.1_CAT1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:76123-77004:- | gene-YJL185C_CBS1585 | rna-NM_001181618.1_CBS1585 | cds-NP_012350.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:100884-101765:- | gene-YJL185C_CBS436 | rna-NM_001181618.1_CBS436 | cds-NP_012350.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:72605-73486:- | gene-YJL185C_CBS6412 | rna-NM_001181618.1_CBS6412 | cds-NP_012350.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:73598-74479:- | gene-YJL185C_CBS6413 | rna-NM_001181618.1_CBS6413 | cds-NP_012350.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:64572-65453:- | gene-YJL185C_CENPK1137D | rna-NM_001181618.1_CENPK1137D | cds-NP_012350.1_CENPK1137D | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:74785-75666:- | gene-YJL185C_EthanolRed | rna-NM_001181618.1_EthanolRed | cds-NP_012350.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:80063-80944:- | gene-YJL185C_FaliES1 | rna-NM_001181618.1_FaliES1 | cds-NP_012350.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000164.1:37790-38671:+ | gene-YJL185C_JAY291 | rna-NM_001181618.1_JAY291 | cds-NP_012350.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:84047-84928:- | gene-YJL185C_MUCL30387 | rna-NM_001181618.1_MUCL30387 | cds-NP_012350.1_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:80208-81089:- | gene-YJL185C_MUCL30388 | rna-NM_001181618.1_MUCL30388 | cds-NP_012350.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:74864-75745:- | gene-YJL185C_MUCL39482 | rna-NM_001181618.1_MUCL39482 | cds-NP_012350.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:79475-80356:- | gene-YJL185C_MUCL42920 | rna-NM_001181618.1_MUCL42920 | cds-NP_012350.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:82074-82955:- | gene-YJL185C_NCIM3186 | rna-NM_001181618.1_NCIM3186 | cds-NP_012350.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:73476-74357:- | gene-YJL185C_NCYC1407 | rna-NM_001181618.1_NCYC1407 | cds-NP_012350.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:86182-87063:- | gene-YJL185C_PE2H3 | rna-NM_001181618.1_PE2H3 | cds-NP_012350.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:85821-86702:- | gene-YJL185C_PE2H4 | rna-NM_001181618.1_PE2H4 | cds-NP_012350.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:82095-82976:- | gene-YJL185C_S288C | rna-NM_001181618.1_S288C | cds-NP_012350.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000022.1:70895-71776:+ | gene-YJL185C_SA1 | rna-NM_001181618.1_SA1 | cds-NP_012350.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:73257-74138:- | gene-YJL185C_ThermosaccDry | rna-NM_001181618.1_ThermosaccDry | cds-NP_012350.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:80140-81021:- | gene-YJL185C_VR1 | rna-NM_001181618.1_VR1 | cds-NP_012350.1_VR1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:60843-61724:- | gene-YJL185C_ZTW1 | rna-NM_001181618.1_ZTW1 | cds-NP_012350.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:85249-86130:- | gene-YJL185C_Sparadoxus | rna-NM_001181618.1_Sparadoxus | cds-NP_012350.1_Sparadoxus | 85.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |