Gene name: ATG34
Reference locus (S288C): YOL083W
Gene biotype: protein_coding
Description: Autophagy-related protein 34; Receptor protein involved in selective autophagy during starvation; specifically involved in the transport of cargo protein alpha-mannosidase (Ams1p); Atg19p paralog
Top 10 interactors (score): AMS1 (0.993); ATG11 (0.983); ATG8 (0.98); ATG36 (0.903); ATG32 (0.89); ATG39 (0.866); HRR25 (0.842); APE1 (0.835); ATG40 (0.828); ATG33 (0.808); ATG1 (0.804); ECM4 (0.802); ATG12 (0.782); APE4 (0.767); ATG16 (0.766); ATG31 (0.765); ATG29 (0.76); DCS2 (0.759); NQM1 (0.758); ATG5 (0.756)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:149308-150546:+ | gene-YOL083W_AKU4011 | rna-NM_001183337.1_AKU4011 | cds-NP_014558.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000172.1:114163-115401:+ | gene-YOL083W_BG1 | rna-NM_001183337.1_BG1 | cds-NP_014558.1_BG1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:150610-151848:+ | gene-YOL083W_Bruggeman | rna-NM_001183337.1_Bruggeman | cds-NP_014558.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:149935-151173:+ | gene-YOL083W_CAT1 | rna-NM_001183337.1_CAT1 | cds-NP_014558.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:143718-144956:+ | gene-YOL083W_CBS1585 | rna-NM_001183337.1_CBS1585 | cds-NP_014558.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:148932-150170:+ | gene-YOL083W_CBS436 | rna-NM_001183337.1_CBS436 | cds-NP_014558.1_CBS436 | 98.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:143623-144861:+ | gene-YOL083W_CBS6412 | rna-NM_001183337.1_CBS6412 | cds-NP_014558.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:150581-151819:+ | gene-YOL083W_CBS6413 | rna-NM_001183337.1_CBS6413 | cds-NP_014558.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:165468-166706:+ | gene-YOL083W_CENPK1137D | rna-NM_001183337.1_CENPK1137D | cds-NP_014558.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:146634-147872:+ | gene-YOL083W_EthanolRed | rna-NM_001183337.1_EthanolRed | cds-NP_014558.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:148961-150199:+ | gene-YOL083W_FaliES1 | rna-NM_001183337.1_FaliES1 | cds-NP_014558.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000018.1:115304-116542:- | gene-YOL083W_JAY291 | rna-NM_001183337.1_JAY291 | cds-NP_014558.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:154813-156051:+ | gene-YOL083W_MUCL30387 | rna-NM_001183337.1_MUCL30387 | cds-NP_014558.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:158488-159726:+ | gene-YOL083W_MUCL30388 | rna-NM_001183337.1_MUCL30388 | cds-NP_014558.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:151639-152877:+ | gene-YOL083W_MUCL39482 | rna-NM_001183337.1_MUCL39482 | cds-NP_014558.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:167161-168399:+ | gene-YOL083W_MUCL42920 | rna-NM_001183337.1_MUCL42920 | cds-NP_014558.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:165603-166841:+ | gene-YOL083W_NCIM3186 | rna-NM_001183337.1_NCIM3186 | cds-NP_014558.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:158236-159474:+ | gene-YOL083W_NCYC1407 | rna-NM_001183337.1_NCYC1407 | cds-NP_014558.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:141282-142520:+ | gene-YOL083W_PE2H3 | rna-NM_001183337.1_PE2H3 | cds-NP_014558.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:152271-153509:+ | gene-YOL083W_PE2H4 | rna-NM_001183337.1_PE2H4 | cds-NP_014558.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:165714-166952:+ | gene-YOL083W_S288C | rna-NM_001183337.1_S288C | cds-NP_014558.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:133594-134832:+ | gene-YOL083W_SA1 | rna-NM_001183337.1_SA1 | cds-NP_014558.1_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:147969-149207:+ | gene-YOL083W_ThermosaccDry | rna-NM_001183337.1_ThermosaccDry | cds-NP_014558.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:148536-150023:+ | gene-YOL083W_VR1 | rna-NM_001183337.1_VR1 | cds-NP_014558.1_VR1 | 81.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000031.1:147665-148903:+ | gene-YOL083W_ZTW1 | rna-NM_001183337.1_ZTW1 | cds-NP_014558.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:151160-152377:+ | gene-YOL083W_Sparadoxus | rna-NM_001183337.1_Sparadoxus | cds-NP_014558.1_Sparadoxus | 81.8 | 97.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |