Gene name: ATG31
Reference locus (S288C): YDR022C
Gene biotype: protein_coding
Description: Autophagy-related protein 31; Autophagy-specific protein required for autophagosome formation; forms a complex with Atg17p and Atg29p that localizes other proteins to the pre-autophagosomal structure; constitutively phosphorylated, and phosphorylation of residue S174 is required for function; high-copy suppressor of CIK1 deletion
Top 10 interactors (score): ATG17 (0.999); ATG13 (0.999); ATG29 (0.999); ATG1 (0.992); ATG9 (0.985); ATG11 (0.983); ATG12 (0.939); ATG2 (0.918); ATG8 (0.917); ATG18 (0.898); VPS30 (0.865); ATG5 (0.862); ATG19 (0.86); ATG16 (0.849); CIK1 (0.844); ATG4 (0.843); ATG3 (0.842); ATG7 (0.819); VPS34 (0.815); ATG38 (0.813)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:473998-474588:- | gene-YDR022C_AKU4011 | rna-NM_001180330.1_AKU4011 | cds-NP_010305.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:75208-75798:+ | gene-YDR022C_BG1 | rna-NM_001180330.1_BG1 | cds-NP_010305.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:502240-502830:- | gene-YDR022C_Bruggeman | rna-NM_001180330.1_Bruggeman | cds-NP_010305.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:487308-487898:- | gene-YDR022C_CAT1 | rna-NM_001180330.1_CAT1 | cds-NP_010305.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:470589-471179:- | gene-YDR022C_CBS1585 | rna-NM_001180330.1_CBS1585 | cds-NP_010305.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:487572-488162:- | gene-YDR022C_CBS436 | rna-NM_001180330.1_CBS436 | cds-NP_010305.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:467499-468089:- | gene-YDR022C_CBS6412 | rna-NM_001180330.1_CBS6412 | cds-NP_010305.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:489778-490368:- | gene-YDR022C_CBS6413 | rna-NM_001180330.1_CBS6413 | cds-NP_010305.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:487037-487627:- | gene-YDR022C_CENPK1137D | rna-NM_001180330.1_CENPK1137D | cds-NP_010305.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:482020-482610:- | gene-YDR022C_EthanolRed | rna-NM_001180330.1_EthanolRed | cds-NP_010305.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:488379-488969:- | gene-YDR022C_FaliES1 | rna-NM_001180330.1_FaliES1 | cds-NP_010305.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000042.1:24626-25216:+ | gene-YDR022C_JAY291 | rna-NM_001180330.1_JAY291 | cds-NP_010305.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:487820-488410:- | gene-YDR022C_MUCL30387 | rna-NM_001180330.1_MUCL30387 | cds-NP_010305.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:478282-478872:- | gene-YDR022C_MUCL30388 | rna-NM_001180330.1_MUCL30388 | cds-NP_010305.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:471957-472547:- | gene-YDR022C_MUCL39482 | rna-NM_001180330.1_MUCL39482 | cds-NP_010305.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:393612-394202:- | gene-YDR022C_MUCL42920 | rna-NM_001180330.1_MUCL42920 | cds-NP_010305.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:487995-488585:- | gene-YDR022C_NCIM3186 | rna-NM_001180330.1_NCIM3186 | cds-NP_010305.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:471390-471980:- | gene-YDR022C_NCYC1407 | rna-NM_001180330.1_NCYC1407 | cds-NP_010305.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:486476-487066:- | gene-YDR022C_PE2H3 | rna-NM_001180330.1_PE2H3 | cds-NP_010305.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:485781-486371:- | gene-YDR022C_PE2H4 | rna-NM_001180330.1_PE2H4 | cds-NP_010305.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:488072-488662:- | gene-YDR022C_S288C | rna-NM_001180330.1_S288C | cds-NP_010305.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000065.1:15241-15831:- | gene-YDR022C_SA1 | rna-NM_001180330.1_SA1 | cds-NP_010305.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:487858-488448:- | gene-YDR022C_ThermosaccDry | rna-NM_001180330.1_ThermosaccDry | cds-NP_010305.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:492427-493017:- | gene-YDR022C_VR1 | rna-NM_001180330.1_VR1 | cds-NP_010305.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:485752-486342:- | gene-YDR022C_ZTW1 | rna-NM_001180330.1_ZTW1 | cds-NP_010305.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:489542-490135:- | gene-YDR022C_Sparadoxus | rna-NM_001180330.1_Sparadoxus | cds-NP_010305.1_Sparadoxus | 87.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |