Gene name: ATG19
Reference locus (S288C): YOL082W
Gene biotype: protein_coding
Description: Autophagy-related protein 19; Receptor protein for the cytoplasm-to-vacuole targeting (Cvt) pathway; delivers cargo proteins aminopeptidase I (Ape1p) and alpha-mannosidase (Ams1p) to the phagophore assembly site for packaging into Cvt vesicles; interaction with Atg19p during the Cvt pathway requires phosphorylation by Hrr25p
Top 10 interactors (score): ATG8 (0.999); APE1 (0.999); ATG11 (0.998); AMS1 (0.996); APE4 (0.969); ATG32 (0.958); ATG1 (0.958); ATG21 (0.933); ICP55 (0.931); ATG5 (0.927); ATG12 (0.922); ATG17 (0.916); ATG29 (0.915); ATG36 (0.91); ATG33 (0.901); ATG9 (0.899); SNX4 (0.895); UBP3 (0.882); HRR25 (0.874); ATG23 (0.87)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:152321-153568:+ | gene-YOL082W_AKU4011 | rna-NM_001183336.1_AKU4011 | cds-NP_014559.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000172.1:117176-118423:+ | gene-YOL082W_BG1 | rna-NM_001183336.1_BG1 | cds-NP_014559.1_BG1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:153623-154870:+ | gene-YOL082W_Bruggeman | rna-NM_001183336.1_Bruggeman | cds-NP_014559.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:153446-154693:+ | gene-YOL082W_CAT1 | rna-NM_001183336.1_CAT1 | cds-NP_014559.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:146731-147978:+ | gene-YOL082W_CBS1585 | rna-NM_001183336.1_CBS1585 | cds-NP_014559.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:151942-153189:+ | gene-YOL082W_CBS436 | rna-NM_001183336.1_CBS436 | cds-NP_014559.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:146636-147883:+ | gene-YOL082W_CBS6412 | rna-NM_001183336.1_CBS6412 | cds-NP_014559.1_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:153594-154841:+ | gene-YOL082W_CBS6413 | rna-NM_001183336.1_CBS6413 | cds-NP_014559.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:168481-169728:+ | gene-YOL082W_CENPK1137D | rna-NM_001183336.1_CENPK1137D | cds-NP_014559.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:149647-150894:+ | gene-YOL082W_EthanolRed | rna-NM_001183336.1_EthanolRed | cds-NP_014559.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:151974-153221:+ | gene-YOL082W_FaliES1 | rna-NM_001183336.1_FaliES1 | cds-NP_014559.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000018.1:112282-113529:- | gene-YOL082W_JAY291 | rna-NM_001183336.1_JAY291 | cds-NP_014559.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:157821-159068:+ | gene-YOL082W_MUCL30387 | rna-NM_001183336.1_MUCL30387 | cds-NP_014559.1_MUCL30387 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:161501-162748:+ | gene-YOL082W_MUCL30388 | rna-NM_001183336.1_MUCL30388 | cds-NP_014559.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:154652-155899:+ | gene-YOL082W_MUCL39482 | rna-NM_001183336.1_MUCL39482 | cds-NP_014559.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:170174-171421:+ | gene-YOL082W_MUCL42920 | rna-NM_001183336.1_MUCL42920 | cds-NP_014559.1_MUCL42920 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:168616-169863:+ | gene-YOL082W_NCIM3186 | rna-NM_001183336.1_NCIM3186 | cds-NP_014559.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:161249-162496:+ | gene-YOL082W_NCYC1407 | rna-NM_001183336.1_NCYC1407 | cds-NP_014559.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:144295-145542:+ | gene-YOL082W_PE2H3 | rna-NM_001183336.1_PE2H3 | cds-NP_014559.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:155284-156531:+ | gene-YOL082W_PE2H4 | rna-NM_001183336.1_PE2H4 | cds-NP_014559.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:168727-169974:+ | gene-YOL082W_S288C | rna-NM_001183336.1_S288C | cds-NP_014559.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000001.1:136607-137854:+ | gene-YOL082W_SA1 | rna-NM_001183336.1_SA1 | cds-NP_014559.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:150982-152229:+ | gene-YOL082W_ThermosaccDry | rna-NM_001183336.1_ThermosaccDry | cds-NP_014559.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:151795-153042:+ | gene-YOL082W_VR1 | rna-NM_001183336.1_VR1 | cds-NP_014559.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000031.1:150678-151925:+ | gene-YOL082W_ZTW1 | rna-NM_001183336.1_ZTW1 | cds-NP_014559.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:154275-155522:+ | gene-YOL082W_Sparadoxus | rna-NM_001183336.1_Sparadoxus | cds-NP_014559.1_Sparadoxus | 87.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |