Gene name: ATG11
Reference locus (S288C): YPR049C
Gene biotype: protein_coding
Description: Autophagy-related protein 11; Adapter protein for pexophagy and the Cvt targeting pathway; directs receptor-bound cargo to the phagophore assembly site (PAS) for packaging into vesicles; required for recruiting other proteins to the PAS; recruits Dnm1p to facilitate fission of mitochondria that are destined for removal by mitophagy; Belongs to the ATG11 family
Top 10 interactors (score): ATG9 (0.999); DNM1 (0.999); ATG32 (0.999); ATG1 (0.999); ATG8 (0.998); ATG19 (0.998); ATG29 (0.998); ATG13 (0.998); ATG17 (0.997); ATG36 (0.995); VPS30 (0.992); ATG2 (0.989); VPS34 (0.988); SNX4 (0.983); ATG34 (0.983); ATG31 (0.983); APE1 (0.982); ATG12 (0.98); VPS15 (0.979); ATG20 (0.976)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:632802-636338:- | gene-YPR049C_AKU4011 | rna-NM_001184146.1_AKU4011 | cds-NP_015374.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:261341-264877:+ | gene-YPR049C_BG1 | rna-NM_001184146.1_BG1 | cds-NP_015374.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:710471-714007:- | gene-YPR049C_Bruggeman | rna-NM_001184146.1_Bruggeman | cds-NP_015374.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:753925-757461:- | gene-YPR049C_CAT1 | rna-NM_001184146.1_CAT1 | cds-NP_015374.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:636488-640024:- | gene-YPR049C_CBS1585 | rna-NM_001184146.1_CBS1585 | cds-NP_015374.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:650867-654403:- | gene-YPR049C_CBS436 | rna-NM_001184146.1_CBS436 | cds-NP_015374.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:640236-643772:- | gene-YPR049C_CBS6412 | rna-NM_001184146.1_CBS6412 | cds-NP_015374.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:633437-636973:- | gene-YPR049C_CBS6413 | rna-NM_001184146.1_CBS6413 | cds-NP_015374.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:661102-664638:- | gene-YPR049C_CENPK1137D | rna-NM_001184146.1_CENPK1137D | cds-NP_015374.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:959993-963529:- | gene-YPR049C_EthanolRed | rna-NM_001184146.1_EthanolRed | cds-NP_015374.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:638630-642166:- | gene-YPR049C_FaliES1 | rna-NM_001184146.1_FaliES1 | cds-NP_015374.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000446.1:10588-14124:- | gene-YPR049C_JAY291 | rna-NM_001184146.1_JAY291 | cds-NP_015374.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:651732-655268:- | gene-YPR049C_MUCL30387 | rna-NM_001184146.1_MUCL30387 | cds-NP_015374.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:650436-653972:- | gene-YPR049C_MUCL30388 | rna-NM_001184146.1_MUCL30388 | cds-NP_015374.1_MUCL30388 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:629745-633281:- | gene-YPR049C_MUCL39482 | rna-NM_001184146.1_MUCL39482 | cds-NP_015374.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:692573-696109:- | gene-YPR049C_MUCL42920 | rna-NM_001184146.1_MUCL42920 | cds-NP_015374.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:661120-664656:- | gene-YPR049C_NCIM3186 | rna-NM_001184146.1_NCIM3186 | cds-NP_015374.1_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:637675-641211:- | gene-YPR049C_NCYC1407 | rna-NM_001184146.1_NCYC1407 | cds-NP_015374.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:643891-647427:- | gene-YPR049C_PE2H3 | rna-NM_001184146.1_PE2H3 | cds-NP_015374.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:643539-647075:- | gene-YPR049C_PE2H4 | rna-NM_001184146.1_PE2H4 | cds-NP_015374.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:661137-664673:- | gene-YPR049C_S288C | rna-NM_001184146.1_S288C | cds-NP_015374.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000026.1:36018-39554:+ | gene-YPR049C_SA1 | rna-NM_001184146.1_SA1 | cds-NP_015374.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:638405-641941:- | gene-YPR049C_ThermosaccDry | rna-NM_001184146.1_ThermosaccDry | cds-NP_015374.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:654564-658100:- | gene-YPR049C_VR1 | rna-NM_001184146.1_VR1 | cds-NP_015374.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:637636-641172:- | gene-YPR049C_ZTW1 | rna-NM_001184146.1_ZTW1 | cds-NP_015374.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:638423-641959:- | gene-YPR049C_Sparadoxus | rna-NM_001184146.1_Sparadoxus | cds-NP_015374.1_Sparadoxus | 88.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |