Gene name: ATC1
Reference locus (S288C): YDR184C
Gene biotype: protein_coding
Description: Nuclear protein; possibly involved in regulation of cation stress responses and/or in the establishment of bipolar budding pattern; relative distribution to the nucleus decreases upon DNA replication stress
Top 10 interactors (score): CIC1 (0.916); ARX1 (0.916); SYO1 (0.911); PUF6 (0.909); BFR2 (0.905); ATH1 (0.894); UTP8 (0.868); SSF1 (0.856); UTP25 (0.856); NOC2 (0.856); UTP6 (0.854); UTP15 (0.848); NOG2 (0.844); RLP24 (0.836); IMP3 (0.834); MRT4 (0.813); NSA2 (0.812); UTP14 (0.808); DBP3 (0.807); NOP14 (0.802)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:799157-800041:- | gene-YDR184C_AKU4011 | rna-NM_001180492.1_AKU4011 | cds-NP_010470.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:325758-326642:+ | gene-YDR184C_BG1 | rna-NM_001180492.1_BG1 | cds-NP_010470.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:831579-832463:- | gene-YDR184C_Bruggeman | rna-NM_001180492.1_Bruggeman | cds-NP_010470.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:818826-819710:- | gene-YDR184C_CAT1 | rna-NM_001180492.1_CAT1 | cds-NP_010470.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:789524-790408:- | gene-YDR184C_CBS1585 | rna-NM_001180492.1_CBS1585 | cds-NP_010470.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:818508-819392:- | gene-YDR184C_CBS436 | rna-NM_001180492.1_CBS436 | cds-NP_010470.1_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:786329-787213:- | gene-YDR184C_CBS6412 | rna-NM_001180492.1_CBS6412 | cds-NP_010470.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:816872-817756:- | gene-YDR184C_CBS6413 | rna-NM_001180492.1_CBS6413 | cds-NP_010470.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:829462-830346:- | gene-YDR184C_CENPK1137D | rna-NM_001180492.1_CENPK1137D | cds-NP_010470.1_CENPK1137D | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:799926-800810:- | gene-YDR184C_EthanolRed | rna-NM_001180492.1_EthanolRed | cds-NP_010470.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:808138-809022:- | gene-YDR184C_FaliES1 | rna-NM_001180492.1_FaliES1 | cds-NP_010470.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000068.1:40340-41225:+ | gene-YDR184C_JAY291 | rna-NM_001180492.1_JAY291 | cds-NP_010470.1_JAY291 | 99.7 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:817225-818109:- | gene-YDR184C_MUCL30387 | rna-NM_001180492.1_MUCL30387 | cds-NP_010470.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:805467-806351:- | gene-YDR184C_MUCL30388 | rna-NM_001180492.1_MUCL30388 | cds-NP_010470.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:790971-791855:- | gene-YDR184C_MUCL39482 | rna-NM_001180492.1_MUCL39482 | cds-NP_010470.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:729668-730552:- | gene-YDR184C_MUCL42920 | rna-NM_001180492.1_MUCL42920 | cds-NP_010470.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:830552-831436:- | gene-YDR184C_NCIM3186 | rna-NM_001180492.1_NCIM3186 | cds-NP_010470.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:794104-794988:- | gene-YDR184C_NCYC1407 | rna-NM_001180492.1_NCYC1407 | cds-NP_010470.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:810856-811740:- | gene-YDR184C_PE2H3 | rna-NM_001180492.1_PE2H3 | cds-NP_010470.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:810161-811045:- | gene-YDR184C_PE2H4 | rna-NM_001180492.1_PE2H4 | cds-NP_010470.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:830629-831513:- | gene-YDR184C_S288C | rna-NM_001180492.1_S288C | cds-NP_010470.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000009.1:176340-177224:- | gene-YDR184C_SA1 | rna-NM_001180492.1_SA1 | cds-NP_010470.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:806293-807177:- | gene-YDR184C_ThermosaccDry | rna-NM_001180492.1_ThermosaccDry | cds-NP_010470.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:821521-822405:- | gene-YDR184C_VR1 | rna-NM_001180492.1_VR1 | cds-NP_010470.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000007.1:69004-69888:- | gene-YDR184C_ZTW1 | rna-NM_001180492.1_ZTW1 | cds-NP_010470.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:811307-812197:- | gene-YDR184C_Sparadoxus | rna-NM_001180492.1_Sparadoxus | cds-NP_010470.1_Sparadoxus | 90.2 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |