Gene name: ASR1
Reference locus (S288C): YPR093C
Gene biotype: protein_coding
Description: Alcohol-sensitive RING finger protein 1; Ubiquitin ligase that modifies and regulates RNA Pol II; involved in a putative alcohol-responsive signaling pathway; accumulates in the nucleus under alcohol stress; has a role in organization of septins and the actin cytoskeleton; contains a Ring/PHD finger domain similar to the mammalian rA9 protein
Top 10 interactors (score): RPO21 (0.885); RPB4 (0.87); RPB7 (0.846); RPB11 (0.806); RPO26 (0.805); RPB2 (0.8); RPB9 (0.79); RPB3 (0.787); RPB10 (0.775); RPB8 (0.774); KEX2 (0.761); RPB5 (0.756); ETP1 (0.749); TOM1 (0.72); MAG2 (0.701); UBC5 (0.699); YBR062C (0.694); HUL5 (0.686); TFG1 (0.675); RPC10 (0.669)
Homologues (species, bitscore): AT3G05670 (Arabidopsis thaliana, 51.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:691238-692104:- | gene-YPR093C_AKU4011 | rna-NM_001184190.1_AKU4011 | cds-NP_015418.2_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:205573-206439:+ | gene-YPR093C_BG1 | rna-NM_001184190.1_BG1 | cds-NP_015418.2_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:768917-769783:- | gene-YPR093C_Bruggeman | rna-NM_001184190.1_Bruggeman | cds-NP_015418.2_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:813217-814083:- | gene-YPR093C_CAT1 | rna-NM_001184190.1_CAT1 | cds-NP_015418.2_CAT1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:695165-696031:- | gene-YPR093C_CBS1585 | rna-NM_001184190.1_CBS1585 | cds-NP_015418.2_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:709793-710659:- | gene-YPR093C_CBS436 | rna-NM_001184190.1_CBS436 | cds-NP_015418.2_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:698300-699166:- | gene-YPR093C_CBS6412 | rna-NM_001184190.1_CBS6412 | cds-NP_015418.2_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:692122-692988:- | gene-YPR093C_CBS6413 | rna-NM_001184190.1_CBS6413 | cds-NP_015418.2_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:719536-720402:- | gene-YPR093C_CENPK1137D | rna-NM_001184190.1_CENPK1137D | cds-NP_015418.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:1018236-1019102:- | gene-YPR093C_EthanolRed | rna-NM_001184190.1_EthanolRed | cds-NP_015418.2_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:697069-697935:- | gene-YPR093C_FaliES1 | rna-NM_001184190.1_FaliES1 | cds-NP_015418.2_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000094.1:18962-19828:- | gene-YPR093C_JAY291 | rna-NM_001184190.1_JAY291 | cds-NP_015418.2_JAY291 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:710175-711041:- | gene-YPR093C_MUCL30387 | rna-NM_001184190.1_MUCL30387 | cds-NP_015418.2_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:708865-709731:- | gene-YPR093C_MUCL30388 | rna-NM_001184190.1_MUCL30388 | cds-NP_015418.2_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:688170-689036:- | gene-YPR093C_MUCL39482 | rna-NM_001184190.1_MUCL39482 | cds-NP_015418.2_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:751016-751882:- | gene-YPR093C_MUCL42920 | rna-NM_001184190.1_MUCL42920 | cds-NP_015418.2_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:719541-720407:- | gene-YPR093C_NCIM3186 | rna-NM_001184190.1_NCIM3186 | cds-NP_015418.2_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:696596-697462:- | gene-YPR093C_NCYC1407 | rna-NM_001184190.1_NCYC1407 | cds-NP_015418.2_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:702998-703864:- | gene-YPR093C_PE2H3 | rna-NM_001184190.1_PE2H3 | cds-NP_015418.2_PE2H3 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:702646-703512:- | gene-YPR093C_PE2H4 | rna-NM_001184190.1_PE2H4 | cds-NP_015418.2_PE2H4 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:719558-720424:- | gene-YPR093C_S288C | rna-NM_001184190.1_S288C | cds-NP_015418.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000028.1:17676-18542:- | gene-YPR093C_SA1 | rna-NM_001184190.1_SA1 | cds-NP_015418.2_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:696844-697710:- | gene-YPR093C_ThermosaccDry | rna-NM_001184190.1_ThermosaccDry | cds-NP_015418.2_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:713487-714353:- | gene-YPR093C_VR1 | rna-NM_001184190.1_VR1 | cds-NP_015418.2_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:696063-696929:- | gene-YPR093C_ZTW1 | rna-NM_001184190.1_ZTW1 | cds-NP_015418.2_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:696804-697673:- | gene-YPR093C_Sparadoxus | rna-NM_001184190.1_Sparadoxus | cds-NP_015418.2_Sparadoxus | 88.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |