ASP3-2 (YLR157C)

Gene profile

Gene name: ASP3-2
Reference locus (S288C): YLR157C
Gene biotype: protein_coding

Description: Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; likely arose in via horizontal gene transfer from the wine yeast Wickerhamomyces anomalus or a close relative; reference strain S288C has four copies of ASP3; ASP3-2 has a paralog, ASP3-4, that arose from a segmental duplication

Top 10 interactors (score): YLR156W (0.957); ASP3-4 (0.873); ASP3-3 (0.873); ASP3-1 (0.872); ENA1 (0.713); ENA2 (0.709); RNH203 (0.671); CUP1-2 (0.615); AMD2 (0.575); CUP1-1 (0.575); BUD31 (0.574); FAP1 (0.564); DAL80 (0.525); YAR068W (0.489); ENA5 (0.485); GAT1 (0.482); LYS5 (0.48); DAL5 (0.473); TRP5 (0.472); PRY3 (0.455)

Homologues (species, bitscore): Aspg (Mus musculus, 52.4); CG8526 (Drosophila melanogaster, 56.2)

External links:
Saccharomyces genome database (SGD)
STRING database
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
S288C GCF_000146045.2 Laboratory Not applicable NC_001144.5:472969-474057:- gene-YLR157C_S288C rna-NM_001182044.1_S288C cds-NP_013258.1_S288C 100.0 100.0 Mismatch 1 1 1 True True False False False

Additional files