Gene name: ASP3-1
Reference locus (S288C): YLR155C
Gene biotype: protein_coding
Description: Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; likely arose in via horizontal gene transfer from the wine yeast Wickerhamomyces anomalus or a close relative; reference strain S288C has four copies of ASP3; ASP3-1 has a paralog, ASP3-3, that arose from a segmental duplication
Top 10 interactors (score): YLR156W (0.973); AAT2 (0.949); AAT1 (0.909); ARG1 (0.908); URA2 (0.907); ADE12 (0.903); ASP3-4 (0.872); ASP3-2 (0.872); ASP3-3 (0.872); ASN2 (0.826); ASN1 (0.826); ASP1 (0.819); GAD1 (0.807); HOM3 (0.807); NIT1 (0.8); URE2 (0.788); GLN3 (0.787); ENA2 (0.761); ENA1 (0.714); ENA5 (0.711)
Homologues (species, bitscore): Aspg (Mus musculus, 52.4); CG8526 (Drosophila melanogaster, 56.2)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | JH711480.1:390-1478:- | gene-YLR155C_CENPK1137D | rna-NM_001182042.1_CENPK1137D | cds-NP_013256.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000373.1:2051-3139:+ | gene-YLR155C_JAY291 | rna-NM_001182042.1_JAY291 | cds-NP_013256.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:469046-470134:- | gene-YLR155C_PE2H3 | rna-NM_001182042.1_PE2H3 | cds-NP_013256.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:468789-469877:- | gene-YLR155C_PE2H4 | rna-NM_001182042.1_PE2H4 | cds-NP_013256.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:469317-470405:- | gene-YLR155C_S288C | rna-NM_001182042.1_S288C | cds-NP_013256.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |