Gene name: ASA1
Reference locus (S288C): YPR085C
Gene biotype: protein_coding
Description: ASTRA-associated protein 1; Subunit of the ASTRA complex, involved in chromatin remodeling; telomere length regulator involved in the stability or biogenesis of PIKKs such as TORC1
Top 10 interactors (score): TTI1 (0.986); TEL2 (0.942); RVB1 (0.926); RVB2 (0.9); TRA1 (0.9); TTI2 (0.9); ATP5 (0.826); TIP41 (0.682); HSH155 (0.671); CMR1 (0.617); RME1 (0.592); IME4 (0.586); TAH1 (0.574); PIH1 (0.57); HOS2 (0.521); CUS1 (0.456); PPH21 (0.451); KOG1 (0.45); YDL206W (0.403)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:680179-681510:- | gene-YPR085C_AKU4011 | rna-NM_001184182.1_AKU4011 | cds-NP_015410.2_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:216169-217500:+ | gene-YPR085C_BG1 | rna-NM_001184182.1_BG1 | cds-NP_015410.2_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:757858-759189:- | gene-YPR085C_Bruggeman | rna-NM_001184182.1_Bruggeman | cds-NP_015410.2_Bruggeman | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:802159-803490:- | gene-YPR085C_CAT1 | rna-NM_001184182.1_CAT1 | cds-NP_015410.2_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:684105-685436:- | gene-YPR085C_CBS1585 | rna-NM_001184182.1_CBS1585 | cds-NP_015410.2_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:698730-700061:- | gene-YPR085C_CBS436 | rna-NM_001184182.1_CBS436 | cds-NP_015410.2_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:687241-688572:- | gene-YPR085C_CBS6412 | rna-NM_001184182.1_CBS6412 | cds-NP_015410.2_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:681062-682393:- | gene-YPR085C_CBS6413 | rna-NM_001184182.1_CBS6413 | cds-NP_015410.2_CBS6413 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:708476-709807:- | gene-YPR085C_CENPK1137D | rna-NM_001184182.1_CENPK1137D | cds-NP_015410.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:1007178-1008509:- | gene-YPR085C_EthanolRed | rna-NM_001184182.1_EthanolRed | cds-NP_015410.2_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:686011-687342:- | gene-YPR085C_FaliES1 | rna-NM_001184182.1_FaliES1 | cds-NP_015410.2_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000094.1:7904-9235:- | gene-YPR085C_JAY291 | rna-NM_001184182.1_JAY291 | cds-NP_015410.2_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:699117-700448:- | gene-YPR085C_MUCL30387 | rna-NM_001184182.1_MUCL30387 | cds-NP_015410.2_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:697821-699137:- | gene-YPR085C_MUCL30388 | rna-NM_001184182.1_MUCL30388 | cds-NP_015410.2_MUCL30388 | 98.7 | 98.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:677112-678443:- | gene-YPR085C_MUCL39482 | rna-NM_001184182.1_MUCL39482 | cds-NP_015410.2_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:739958-741289:- | gene-YPR085C_MUCL42920 | rna-NM_001184182.1_MUCL42920 | cds-NP_015410.2_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:708480-709811:- | gene-YPR085C_NCIM3186 | rna-NM_001184182.1_NCIM3186 | cds-NP_015410.2_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:685538-686869:- | gene-YPR085C_NCYC1407 | rna-NM_001184182.1_NCYC1407 | cds-NP_015410.2_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:691940-693271:- | gene-YPR085C_PE2H3 | rna-NM_001184182.1_PE2H3 | cds-NP_015410.2_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:691588-692919:- | gene-YPR085C_PE2H4 | rna-NM_001184182.1_PE2H4 | cds-NP_015410.2_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:708497-709828:- | gene-YPR085C_S288C | rna-NM_001184182.1_S288C | cds-NP_015410.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000028.1:6617-7948:- | gene-YPR085C_SA1 | rna-NM_001184182.1_SA1 | cds-NP_015410.2_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:685786-687117:- | gene-YPR085C_ThermosaccDry | rna-NM_001184182.1_ThermosaccDry | cds-NP_015410.2_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:702428-703759:- | gene-YPR085C_VR1 | rna-NM_001184182.1_VR1 | cds-NP_015410.2_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:685005-686336:- | gene-YPR085C_ZTW1 | rna-NM_001184182.1_ZTW1 | cds-NP_015410.2_ZTW1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:685741-687072:- | gene-YPR085C_Sparadoxus | rna-NM_001184182.1_Sparadoxus | cds-NP_015410.2_Sparadoxus | 85.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |