Gene name: ARP9
Reference locus (S288C): YMR033W
Gene biotype: protein_coding
Description: Actin-like protein ARP9; Component of both the SWI/SNF and RSC chromatin remodeling complexes; actin-related protein involved in transcriptional regulation
Top 10 interactors (score): RSC58 (0.999); SNF5 (0.999); NPL6 (0.999); RSC4 (0.999); RSC8 (0.999); SWI1 (0.999); RSC9 (0.999); ARP7 (0.999); SNF6 (0.999); SWI3 (0.999); SNF2 (0.999); SNF12 (0.999); RTT102 (0.999); STH1 (0.999); RSC6 (0.999); RSC2 (0.999); RSC3 (0.998); RSC1 (0.998); SWP82 (0.998); SFH1 (0.998)
Homologues (species, bitscore): ARP7 (Arabidopsis thaliana, 55.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:387385-388874:+ | gene-YMR033W_AKU4011 | rna-NM_001182530.1_AKU4011 | cds-NP_013747.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:153979-155468:- | gene-YMR033W_BG1 | rna-NM_001182530.1_BG1 | cds-NP_013747.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:327326-328815:+ | gene-YMR033W_Bruggeman | rna-NM_001182530.1_Bruggeman | cds-NP_013747.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:329840-331329:+ | gene-YMR033W_CAT1 | rna-NM_001182530.1_CAT1 | cds-NP_013747.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:320326-321815:+ | gene-YMR033W_CBS1585 | rna-NM_001182530.1_CBS1585 | cds-NP_013747.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:325877-327366:+ | gene-YMR033W_CBS436 | rna-NM_001182530.1_CBS436 | cds-NP_013747.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:433728-435217:+ | gene-YMR033W_CBS6412 | rna-NM_001182530.1_CBS6412 | cds-NP_013747.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:319582-321071:+ | gene-YMR033W_CBS6413 | rna-NM_001182530.1_CBS6413 | cds-NP_013747.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:332517-334006:+ | gene-YMR033W_CENPK1137D | rna-NM_001182530.1_CENPK1137D | cds-NP_013747.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:320158-321647:+ | gene-YMR033W_EthanolRed | rna-NM_001182530.1_EthanolRed | cds-NP_013747.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:323340-324829:+ | gene-YMR033W_FaliES1 | rna-NM_001182530.1_FaliES1 | cds-NP_013747.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000033.1:112111-113600:- | gene-YMR033W_JAY291 | rna-NM_001182530.1_JAY291 | cds-NP_013747.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:325285-326774:+ | gene-YMR033W_MUCL30387 | rna-NM_001182530.1_MUCL30387 | cds-NP_013747.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:329709-331198:+ | gene-YMR033W_MUCL30388 | rna-NM_001182530.1_MUCL30388 | cds-NP_013747.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:320609-322098:+ | gene-YMR033W_MUCL39482 | rna-NM_001182530.1_MUCL39482 | cds-NP_013747.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:326430-327919:+ | gene-YMR033W_MUCL42920 | rna-NM_001182530.1_MUCL42920 | cds-NP_013747.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:337742-339231:+ | gene-YMR033W_NCIM3186 | rna-NM_001182530.1_NCIM3186 | cds-NP_013747.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:320526-322015:+ | gene-YMR033W_NCYC1407 | rna-NM_001182530.1_NCYC1407 | cds-NP_013747.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:326472-327961:+ | gene-YMR033W_PE2H3 | rna-NM_001182530.1_PE2H3 | cds-NP_013747.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:332567-334056:+ | gene-YMR033W_PE2H4 | rna-NM_001182530.1_PE2H4 | cds-NP_013747.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:337788-339277:+ | gene-YMR033W_S288C | rna-NM_001182530.1_S288C | cds-NP_013747.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:198986-200475:- | gene-YMR033W_SA1 | rna-NM_001182530.1_SA1 | cds-NP_013747.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:320409-321898:+ | gene-YMR033W_ThermosaccDry | rna-NM_001182530.1_ThermosaccDry | cds-NP_013747.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:325112-326601:+ | gene-YMR033W_VR1 | rna-NM_001182530.1_VR1 | cds-NP_013747.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:299425-300914:+ | gene-YMR033W_ZTW1 | rna-NM_001182530.1_ZTW1 | cds-NP_013747.1_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:333348-334838:+ | gene-YMR033W_Sparadoxus | rna-NM_001182530.1_Sparadoxus | cds-NP_013747.1_Sparadoxus | 90.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |