Gene name: ARP7
Reference locus (S288C): YPR034W
Gene biotype: protein_coding
Description: Actin-related protein 7; Component of both the SWI/SNF and RSC chromatin remodeling complexes; actin-related protein involved in transcriptional regulation
Top 10 interactors (score): SNF5 (0.999); SFH1 (0.999); STH1 (0.999); RSC6 (0.999); RSC2 (0.999); SNF2 (0.999); SNF12 (0.999); RTT102 (0.999); SWP82 (0.999); RSC8 (0.999); SWI1 (0.999); SWI3 (0.999); SNF6 (0.999); ARP9 (0.999); RSC58 (0.999); RSC4 (0.999); NPL6 (0.999); RSC3 (0.998); RSC9 (0.998); RSC1 (0.997)
Homologues (species, bitscore): ACTL6B (Homo sapiens, 93.2); Actl6b (Mus musculus, 92.8); actl6a (Danio rerio, 97.8); actl6a (Xenopus tropicalis, 86.7); Bap55 (Drosophila melanogaster, 90.1); swsn-6 (Caenorhabditis elegans, 84.7); ARP4 (Arabidopsis thaliana, 85.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:611186-612619:+ | gene-YPR034W_AKU4011 | rna-NM_001184131.1_AKU4011 | cds-NP_015359.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:285047-286480:- | gene-YPR034W_BG1 | rna-NM_001184131.1_BG1 | cds-NP_015359.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:688845-690278:+ | gene-YPR034W_Bruggeman | rna-NM_001184131.1_Bruggeman | cds-NP_015359.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:731814-733247:+ | gene-YPR034W_CAT1 | rna-NM_001184131.1_CAT1 | cds-NP_015359.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:614870-616303:+ | gene-YPR034W_CBS1585 | rna-NM_001184131.1_CBS1585 | cds-NP_015359.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:629256-630689:+ | gene-YPR034W_CBS436 | rna-NM_001184131.1_CBS436 | cds-NP_015359.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:618618-620051:+ | gene-YPR034W_CBS6412 | rna-NM_001184131.1_CBS6412 | cds-NP_015359.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:611818-613251:+ | gene-YPR034W_CBS6413 | rna-NM_001184131.1_CBS6413 | cds-NP_015359.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:639501-640934:+ | gene-YPR034W_CENPK1137D | rna-NM_001184131.1_CENPK1137D | cds-NP_015359.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:609115-610548:+ | gene-YPR034W_EthanolRed | rna-NM_001184131.1_EthanolRed | cds-NP_015359.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:616918-618351:+ | gene-YPR034W_FaliES1 | rna-NM_001184131.1_FaliES1 | cds-NP_015359.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000116.1:9545-10978:- | gene-YPR034W_JAY291 | rna-NM_001184131.1_JAY291 | cds-NP_015359.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:630057-631490:+ | gene-YPR034W_MUCL30387 | rna-NM_001184131.1_MUCL30387 | cds-NP_015359.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:628738-630171:+ | gene-YPR034W_MUCL30388 | rna-NM_001184131.1_MUCL30388 | cds-NP_015359.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:608127-609560:+ | gene-YPR034W_MUCL39482 | rna-NM_001184131.1_MUCL39482 | cds-NP_015359.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:670935-672368:+ | gene-YPR034W_MUCL42920 | rna-NM_001184131.1_MUCL42920 | cds-NP_015359.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:639508-640941:+ | gene-YPR034W_NCIM3186 | rna-NM_001184131.1_NCIM3186 | cds-NP_015359.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:616058-617491:+ | gene-YPR034W_NCYC1407 | rna-NM_001184131.1_NCYC1407 | cds-NP_015359.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:622286-623719:+ | gene-YPR034W_PE2H3 | rna-NM_001184131.1_PE2H3 | cds-NP_015359.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:621934-623367:+ | gene-YPR034W_PE2H4 | rna-NM_001184131.1_PE2H4 | cds-NP_015359.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:639525-640958:+ | gene-YPR034W_S288C | rna-NM_001184131.1_S288C | cds-NP_015359.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000026.1:59817-61250:- | gene-YPR034W_SA1 | rna-NM_001184131.1_SA1 | cds-NP_015359.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:616718-618151:+ | gene-YPR034W_ThermosaccDry | rna-NM_001184131.1_ThermosaccDry | cds-NP_015359.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:632947-634380:+ | gene-YPR034W_VR1 | rna-NM_001184131.1_VR1 | cds-NP_015359.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:616037-617470:+ | gene-YPR034W_ZTW1 | rna-NM_001184131.1_ZTW1 | cds-NP_015359.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:616821-618254:+ | gene-YPR034W_Sparadoxus | rna-NM_001184131.1_Sparadoxus | cds-NP_015359.1_Sparadoxus | 92.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |