Gene name: ARP10
Reference locus (S288C): YDR106W
Gene biotype: protein_coding
Description: Actin-like protein ARP10; Component of the dynactin complex; localized to the pointed end of the Arp1p filament; may regulate membrane association of the complex; Belongs to the actin family. ARP10 subfamily
Top 10 interactors (score): NIP100 (0.986); LDB18 (0.971); JNM1 (0.947); ARP1 (0.895); DYN3 (0.716); NDL1 (0.712); PAC11 (0.651); PAC1 (0.573); KIP1 (0.569); KIP2 (0.562); DYN1 (0.521); ABM1 (0.485); DCG1 (0.453); YKR011C (0.45)
Homologues (species, bitscore): actr10 (Danio rerio, 52.0); Arp10 (Drosophila melanogaster, 53.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:638282-639136:+ | gene-YDR106W_AKU4011 | rna-NM_001180414.1_AKU4011 | cds-NP_010391.1_AKU4011 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000080.1:485777-486631:- | gene-YDR106W_BG1 | rna-NM_001180414.1_BG1 | cds-NP_010391.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:670369-671223:+ | gene-YDR106W_Bruggeman | rna-NM_001180414.1_Bruggeman | cds-NP_010391.1_Bruggeman | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:656243-657097:+ | gene-YDR106W_CAT1 | rna-NM_001180414.1_CAT1 | cds-NP_010391.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:629301-630155:+ | gene-YDR106W_CBS1585 | rna-NM_001180414.1_CBS1585 | cds-NP_010391.1_CBS1585 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:654702-655556:+ | gene-YDR106W_CBS436 | rna-NM_001180414.1_CBS436 | cds-NP_010391.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:625716-626570:+ | gene-YDR106W_CBS6412 | rna-NM_001180414.1_CBS6412 | cds-NP_010391.1_CBS6412 | 98.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:654247-655101:+ | gene-YDR106W_CBS6413 | rna-NM_001180414.1_CBS6413 | cds-NP_010391.1_CBS6413 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:659763-660617:+ | gene-YDR106W_CENPK1137D | rna-NM_001180414.1_CENPK1137D | cds-NP_010391.1_CENPK1137D | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:640065-640919:+ | gene-YDR106W_EthanolRed | rna-NM_001180414.1_EthanolRed | cds-NP_010391.1_EthanolRed | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:646859-647713:+ | gene-YDR106W_FaliES1 | rna-NM_001180414.1_FaliES1 | cds-NP_010391.1_FaliES1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000125.1:15528-16382:+ | gene-YDR106W_JAY291 | rna-NM_001180414.1_JAY291 | cds-NP_010391.1_JAY291 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:656277-657131:+ | gene-YDR106W_MUCL30387 | rna-NM_001180414.1_MUCL30387 | cds-NP_010391.1_MUCL30387 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:645299-646153:+ | gene-YDR106W_MUCL30388 | rna-NM_001180414.1_MUCL30388 | cds-NP_010391.1_MUCL30388 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:630671-631525:+ | gene-YDR106W_MUCL39482 | rna-NM_001180414.1_MUCL39482 | cds-NP_010391.1_MUCL39482 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005426.1:568619-569473:+ | gene-YDR106W_MUCL42920 | rna-NM_001180414.1_MUCL42920 | cds-NP_010391.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:666927-667781:+ | gene-YDR106W_NCIM3186 | rna-NM_001180414.1_NCIM3186 | cds-NP_010391.1_NCIM3186 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:629582-630436:+ | gene-YDR106W_NCYC1407 | rna-NM_001180414.1_NCYC1407 | cds-NP_010391.1_NCYC1407 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:649395-650249:+ | gene-YDR106W_PE2H3 | rna-NM_001180414.1_PE2H3 | cds-NP_010391.1_PE2H3 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:648700-649554:+ | gene-YDR106W_PE2H4 | rna-NM_001180414.1_PE2H4 | cds-NP_010391.1_PE2H4 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:667004-667858:+ | gene-YDR106W_S288C | rna-NM_001180414.1_S288C | cds-NP_010391.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000009.1:15609-16463:+ | gene-YDR106W_SA1 | rna-NM_001180414.1_SA1 | cds-NP_010391.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:646388-647242:+ | gene-YDR106W_ThermosaccDry | rna-NM_001180414.1_ThermosaccDry | cds-NP_010391.1_ThermosaccDry | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:659310-660164:+ | gene-YDR106W_VR1 | rna-NM_001180414.1_VR1 | cds-NP_010391.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:643973-644827:+ | gene-YDR106W_ZTW1 | rna-NM_001180414.1_ZTW1 | cds-NP_010391.1_ZTW1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:648658-649512:+ | gene-YDR106W_Sparadoxus | rna-NM_001180414.1_Sparadoxus | cds-NP_010391.1_Sparadoxus | 85.1 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |