ARN1 (YHL040C)


Gene profile

Gene name: ARN1
Reference locus (S288C): YHL040C
Gene biotype: protein_coding

Description: Mfs transporter, sit family, siderophore-iron:h+ symporter; ARN family transporter for siderophore-iron chelates; responsible for uptake of iron bound to ferrirubin, ferrirhodin, and related siderophores; protein increases in abundance and relocalizes to the vacuole upon DNA replication stress

Top 10 interactors (score): FET3 (0.971); FTR1 (0.946); FIT2 (0.933); SIT1 (0.919); FIT3 (0.907); TIS11 (0.875); AFT1 (0.851); FIT1 (0.792); FRE6 (0.788); GGA2 (0.787); FRE1 (0.783); FRE3 (0.772); FET5 (0.759); AFT2 (0.748); CCC2 (0.732); SMF3 (0.727); MRS4 (0.714); FRE2 (0.701); FTH1 (0.698); VBA2 (0.691)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005302.1:13944-15827:- gene-YHL040C_AKU4011 rna-NM_001179120.1_AKU4011 cds-NP_011823.1_AKU4011 99.1 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000180.1:60998-62881:+ gene-YHL040C_BG1 rna-NM_001179120.1_BG1 cds-NP_011823.1_BG1 99.0 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005510.1:20607-22490:- gene-YHL040C_Bruggeman rna-NM_001179120.1_Bruggeman cds-NP_011823.1_Bruggeman 99.7 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005526.1:14862-16745:- gene-YHL040C_CAT1 rna-NM_001179120.1_CAT1 cds-NP_011823.1_CAT1 99.5 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005366.1:14548-16431:- gene-YHL040C_CBS1585 rna-NM_001179120.1_CBS1585 cds-NP_011823.1_CBS1585 99.4 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005350.1:7132-9015:- gene-YHL040C_CBS436 rna-NM_001179120.1_CBS436 cds-NP_011823.1_CBS436 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005334.1:14497-16380:- gene-YHL040C_CBS6412 rna-NM_001179120.1_CBS6412 cds-NP_011823.1_CBS6412 99.1 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005318.1:13963-15846:- gene-YHL040C_CBS6413 rna-NM_001179120.1_CBS6413 cds-NP_011823.1_CBS6413 99.1 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001529.1:12253-14136:- gene-YHL040C_CENPK1137D rna-NM_001179120.1_CENPK1137D cds-NP_011823.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005478.1:14173-16056:- gene-YHL040C_EthanolRed rna-NM_001179120.1_EthanolRed cds-NP_011823.1_EthanolRed 99.0 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005542.1:14502-16380:- gene-YHL040C_FaliES1 rna-NM_001179120.1_FaliES1 cds-NP_011823.1_FaliES1 98.8 99.7 Unannotated 1 1 0 False False False True False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000157.1:6451-8334:- gene-YHL040C_JAY291 rna-NM_001179120.1_JAY291 cds-NP_011823.1_JAY291 99.4 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005414.1:16441-18324:- gene-YHL040C_MUCL30387 rna-NM_001179120.1_MUCL30387 cds-NP_011823.1_MUCL30387 99.7 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005446.1:18278-20161:- gene-YHL040C_MUCL30388 rna-NM_001179120.1_MUCL30388 cds-NP_011823.1_MUCL30388 99.5 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005286.1:13539-15422:- gene-YHL040C_MUCL39482 rna-NM_001179120.1_MUCL39482 cds-NP_011823.1_MUCL39482 99.1 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005430.1:17508-19391:- gene-YHL040C_MUCL42920 rna-NM_001179120.1_MUCL42920 cds-NP_011823.1_MUCL42920 99.5 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011817.1:18970-20853:- gene-YHL040C_NCIM3186 rna-NM_001179120.1_NCIM3186 cds-NP_011823.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005270.1:13023-14906:- gene-YHL040C_NCYC1407 rna-NM_001179120.1_NCYC1407 cds-NP_011823.1_NCYC1407 99.0 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994147.1:9314-11197:- gene-YHL040C_PE2H3 rna-NM_001179120.1_PE2H3 cds-NP_011823.1_PE2H3 99.0 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999879.1:16690-18573:- gene-YHL040C_PE2H4 rna-NM_001179120.1_PE2H4 cds-NP_011823.1_PE2H4 99.4 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001140.6:19088-20971:- gene-YHL040C_S288C rna-NM_001179120.1_S288C cds-NP_011823.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000005.1:3381-5264:- gene-YHL040C_SA1 rna-NM_001179120.1_SA1 cds-NP_011823.1_SA1 99.5 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005494.1:15602-17469:- gene-YHL040C_ThermosaccDry rna-NM_001179120.1_ThermosaccDry cds-NP_011823.1_ThermosaccDry 98.0 99.1 Verified 1 1 0 False False False True False
VR1 GCA_001738595.1 Bioethanol South America CM005462.1:20296-22179:- gene-YHL040C_VR1 rna-NM_001179120.1_VR1 cds-NP_011823.1_VR1 99.5 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000017.1:6800-8683:- gene-YHL040C_ZTW1 rna-NM_001179120.1_ZTW1 cds-NP_011823.1_ZTW1 99.3 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047494.1:13124-15007:- gene-YHL040C_Sparadoxus rna-NM_001179120.1_Sparadoxus cds-NP_011823.1_Sparadoxus 90.3 100.0 Verified 1 1 1 False True False False False

Additional files