Gene name: ARL3
Reference locus (S288C): YPL051W
Gene biotype: protein_coding
Description: ADP-ribosylation factor-like protein 3; ARF-like small GTPase of the RAS superfamily; required for recruitment of Arl1p, a GTPase that regulates membrane traffic, to the Golgi apparatus; NatC-catalyzed N-terminal acetylation regulates Golgi membrane association mediated by interaction with membrane receptor, Sys1p; similar to ADP-ribosylation factor and orthologous to mammalian ARFRP1
Top 10 interactors (score): SYS1 (0.994); MAK3 (0.975); MAK10 (0.963); MAK31 (0.943); YPT6 (0.858); IMH1 (0.836); ARL1 (0.834); COG8 (0.819); GOS1 (0.813); GYP1 (0.766); COG6 (0.761); COG5 (0.759); SEC7 (0.755); SRY1 (0.745); TRS20 (0.741); GRH1 (0.738); RUD3 (0.733); TLG2 (0.719); ENV7 (0.709); NAF1 (0.691)
Homologues (species, bitscore): ARFRP1 (Homo sapiens, 190.7); Arfrp1 (Mus musculus, 191.4); arfrp1 (Danio rerio, 194.9); arl14 (Xenopus tropicalis, 124.8); Arfrp1 (Drosophila melanogaster, 187.2); Y54E10BR.2 (Caenorhabditis elegans, 121.7); GB1 (Arabidopsis thaliana, 143.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:431460-432056:+ | gene-YPL051W_AKU4011 | rna-NM_001183865.1_AKU4011 | cds-NP_015274.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:465380-465976:- | gene-YPL051W_BG1 | rna-NM_001183865.1_BG1 | cds-NP_015274.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:508412-509008:+ | gene-YPL051W_Bruggeman | rna-NM_001183865.1_Bruggeman | cds-NP_015274.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:548111-548707:+ | gene-YPL051W_CAT1 | rna-NM_001183865.1_CAT1 | cds-NP_015274.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:435529-436125:+ | gene-YPL051W_CBS1585 | rna-NM_001183865.1_CBS1585 | cds-NP_015274.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:449656-450252:+ | gene-YPL051W_CBS436 | rna-NM_001183865.1_CBS436 | cds-NP_015274.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:439722-440318:+ | gene-YPL051W_CBS6412 | rna-NM_001183865.1_CBS6412 | cds-NP_015274.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:432081-432677:+ | gene-YPL051W_CBS6413 | rna-NM_001183865.1_CBS6413 | cds-NP_015274.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:459937-460533:+ | gene-YPL051W_CENPK1137D | rna-NM_001183865.1_CENPK1137D | cds-NP_015274.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:429818-430414:+ | gene-YPL051W_EthanolRed | rna-NM_001183865.1_EthanolRed | cds-NP_015274.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:437648-438244:+ | gene-YPL051W_FaliES1 | rna-NM_001183865.1_FaliES1 | cds-NP_015274.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000283.1:46247-46843:+ | gene-YPL051W_JAY291 | rna-NM_001183865.1_JAY291 | cds-NP_015274.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:449344-449940:+ | gene-YPL051W_MUCL30387 | rna-NM_001183865.1_MUCL30387 | cds-NP_015274.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:448484-449080:+ | gene-YPL051W_MUCL30388 | rna-NM_001183865.1_MUCL30388 | cds-NP_015274.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:428845-429441:+ | gene-YPL051W_MUCL39482 | rna-NM_001183865.1_MUCL39482 | cds-NP_015274.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:487444-488040:+ | gene-YPL051W_MUCL42920 | rna-NM_001183865.1_MUCL42920 | cds-NP_015274.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:459946-460542:+ | gene-YPL051W_NCIM3186 | rna-NM_001183865.1_NCIM3186 | cds-NP_015274.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:436123-436719:+ | gene-YPL051W_NCYC1407 | rna-NM_001183865.1_NCYC1407 | cds-NP_015274.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:442740-443336:+ | gene-YPL051W_PE2H3 | rna-NM_001183865.1_PE2H3 | cds-NP_015274.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:442344-442940:+ | gene-YPL051W_PE2H4 | rna-NM_001183865.1_PE2H4 | cds-NP_015274.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:459963-460559:+ | gene-YPL051W_S288C | rna-NM_001183865.1_S288C | cds-NP_015274.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000057.1:75410-76006:+ | gene-YPL051W_SA1 | rna-NM_001183865.1_SA1 | cds-NP_015274.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:437447-438043:+ | gene-YPL051W_ThermosaccDry | rna-NM_001183865.1_ThermosaccDry | cds-NP_015274.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:452272-452868:+ | gene-YPL051W_VR1 | rna-NM_001183865.1_VR1 | cds-NP_015274.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:436754-437350:+ | gene-YPL051W_ZTW1 | rna-NM_001183865.1_ZTW1 | cds-NP_015274.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:437389-437985:+ | gene-YPL051W_Sparadoxus | rna-NM_001183865.1_Sparadoxus | cds-NP_015274.1_Sparadoxus | 93.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |