ARG8 (YOL140W)


Gene profile

Gene name: ARG8
Reference locus (S288C): YOL140W
Gene biotype: protein_coding

Description: Acetylornithine aminotransferase, mitochondrial; Acetylornithine aminotransferase; catalyzes the fourth step in the biosynthesis of the arginine precursor ornithine; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family

Top 10 interactors (score): ARG5,6 (0.999); ARG3 (0.999); ARG7 (0.991); ARG1 (0.964); ARG2 (0.961); ARG4 (0.945); COX2 (0.88); CPA1 (0.863); TRP3 (0.807); ATP6 (0.798); COB (0.791); ORT1 (0.782); ARG82 (0.781); ARG81 (0.78); ARG80 (0.78); CAR1 (0.778); HIS4 (0.766); LYS1 (0.756); PRO2 (0.735); CBP3 (0.735)

Homologues (species, bitscore): OAT (Homo sapiens, 181.4); Oat (Mus musculus, 182.6); oat (Danio rerio, 170.2); oat.1 (Xenopus tropicalis, 184.9); Oat (Drosophila melanogaster, 191.0); C16A3.10 (Caenorhabditis elegans, 198.7); WIN1 (Arabidopsis thaliana, 303.5)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:47405-48676:+ gene-YOL140W_AKU4011 rna-NM_001183394.1_AKU4011 cds-NP_014501.1_AKU4011 99.4 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000172.1:13042-14313:+ gene-YOL140W_BG1 rna-NM_001183394.1_BG1 cds-NP_014501.1_BG1 99.2 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:48690-49961:+ gene-YOL140W_Bruggeman rna-NM_001183394.1_Bruggeman cds-NP_014501.1_Bruggeman 100.0 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:47657-48928:+ gene-YOL140W_CAT1 rna-NM_001183394.1_CAT1 cds-NP_014501.1_CAT1 99.4 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:41889-43160:+ gene-YOL140W_CBS1585 rna-NM_001183394.1_CBS1585 cds-NP_014501.1_CBS1585 99.3 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005357.1:47745-49016:+ gene-YOL140W_CBS436 rna-NM_001183394.1_CBS436 cds-NP_014501.1_CBS436 99.2 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005341.1:41764-43035:+ gene-YOL140W_CBS6412 rna-NM_001183394.1_CBS6412 cds-NP_014501.1_CBS6412 99.3 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:48230-49501:+ gene-YOL140W_CBS6413 rna-NM_001183394.1_CBS6413 cds-NP_014501.1_CBS6413 99.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:58657-59928:+ gene-YOL140W_CENPK1137D rna-NM_001183394.1_CENPK1137D cds-NP_014501.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005485.1:45675-46946:+ gene-YOL140W_EthanolRed rna-NM_001183394.1_EthanolRed cds-NP_014501.1_EthanolRed 99.4 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:47698-48969:+ gene-YOL140W_FaliES1 rna-NM_001183394.1_FaliES1 cds-NP_014501.1_FaliES1 99.4 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000329.1:33587-34858:- gene-YOL140W_JAY291 rna-NM_001183394.1_JAY291 cds-NP_014501.1_JAY291 99.2 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:53311-54582:+ gene-YOL140W_MUCL30387 rna-NM_001183394.1_MUCL30387 cds-NP_014501.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:56322-57593:+ gene-YOL140W_MUCL30388 rna-NM_001183394.1_MUCL30388 cds-NP_014501.1_MUCL30388 100.0 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:49816-51087:+ gene-YOL140W_MUCL39482 rna-NM_001183394.1_MUCL39482 cds-NP_014501.1_MUCL39482 99.7 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:65716-66987:+ gene-YOL140W_MUCL42920 rna-NM_001183394.1_MUCL42920 cds-NP_014501.1_MUCL42920 100.0 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:58648-59919:+ gene-YOL140W_NCIM3186 rna-NM_001183394.1_NCIM3186 cds-NP_014501.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:55883-57154:+ gene-YOL140W_NCYC1407 rna-NM_001183394.1_NCYC1407 cds-NP_014501.1_NCYC1407 99.4 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:34281-35552:+ gene-YOL140W_PE2H3 rna-NM_001183394.1_PE2H3 cds-NP_014501.1_PE2H3 99.2 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:51229-52500:+ gene-YOL140W_PE2H4 rna-NM_001183394.1_PE2H4 cds-NP_014501.1_PE2H4 99.2 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:58759-60030:+ gene-YOL140W_S288C rna-NM_001183394.1_S288C cds-NP_014501.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000001.1:32143-33414:+ gene-YOL140W_SA1 rna-NM_001183394.1_SA1 cds-NP_014501.1_SA1 99.2 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:46841-48112:+ gene-YOL140W_ThermosaccDry rna-NM_001183394.1_ThermosaccDry cds-NP_014501.1_ThermosaccDry 99.4 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:47503-48774:+ gene-YOL140W_VR1 rna-NM_001183394.1_VR1 cds-NP_014501.1_VR1 99.2 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000031.1:46597-47868:+ gene-YOL140W_ZTW1 rna-NM_001183394.1_ZTW1 cds-NP_014501.1_ZTW1 99.3 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:49087-50358:+ gene-YOL140W_Sparadoxus rna-NM_001183394.1_Sparadoxus cds-NP_014501.1_Sparadoxus 91.6 100.0 Verified 1 1 1 False True False False False

Additional files