Gene name: ARG4
Reference locus (S288C): YHR018C
Gene biotype: protein_coding
Description: Argininosuccinate lyase; catalyzes the final step in the arginine biosynthesis pathway; Belongs to the lyase 1 family. Argininosuccinate lyase subfamily
Top 10 interactors (score): ARG1 (0.999); ARG3 (0.999); ARG5,6 (0.999); HIS4 (0.994); ARG7 (0.991); CAR1 (0.989); HIS1 (0.985); CPA2 (0.969); ADE13 (0.966); URA3 (0.965); ARG8 (0.945); ARG2 (0.933); YGL117W (0.925); HIS5 (0.915); FUM1 (0.909); ORT1 (0.902); LYS1 (0.881); CAR2 (0.88); CIT1 (0.865); IDH2 (0.864)
Homologues (species, bitscore): ASL (Homo sapiens, 515.4); Asl (Mus musculus, 519.6); asl (Danio rerio, 520.4); asl (Xenopus tropicalis, 423.3); CG9510 (Drosophila melanogaster, 432.2); fum-1 (Caenorhabditis elegans, 58.2); AT5G10920 (Arabidopsis thaliana, 343.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:128552-129943:- | gene-YHR018C_AKU4011 | rna-NM_001179148.1_AKU4011 | cds-NP_011882.1_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000053.1:48463-49854:- | gene-YHR018C_BG1 | rna-NM_001179148.1_BG1 | cds-NP_011882.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:135131-136522:- | gene-YHR018C_Bruggeman | rna-NM_001179148.1_Bruggeman | cds-NP_011882.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:129716-131107:- | gene-YHR018C_CAT1 | rna-NM_001179148.1_CAT1 | cds-NP_011882.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:128885-130276:- | gene-YHR018C_CBS1585 | rna-NM_001179148.1_CBS1585 | cds-NP_011882.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:122222-123613:- | gene-YHR018C_CBS436 | rna-NM_001179148.1_CBS436 | cds-NP_011882.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:128575-129966:- | gene-YHR018C_CBS6412 | rna-NM_001179148.1_CBS6412 | cds-NP_011882.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:128218-129609:- | gene-YHR018C_CBS6413 | rna-NM_001179148.1_CBS6413 | cds-NP_011882.1_CBS6413 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:133281-134672:- | gene-YHR018C_CENPK1137D | rna-NM_001179148.1_CENPK1137D | cds-NP_011882.1_CENPK1137D | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:128098-129489:- | gene-YHR018C_EthanolRed | rna-NM_001179148.1_EthanolRed | cds-NP_011882.1_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:129077-130468:- | gene-YHR018C_FaliES1 | rna-NM_001179148.1_FaliES1 | cds-NP_011882.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000424.1:4958-6349:+ | gene-YHR018C_JAY291 | rna-NM_001179148.1_JAY291 | cds-NP_011882.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:135138-136529:- | gene-YHR018C_MUCL30387 | rna-NM_001179148.1_MUCL30387 | cds-NP_011882.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:135622-137013:- | gene-YHR018C_MUCL30388 | rna-NM_001179148.1_MUCL30388 | cds-NP_011882.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:127912-129303:- | gene-YHR018C_MUCL39482 | rna-NM_001179148.1_MUCL39482 | cds-NP_011882.1_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:133441-134832:- | gene-YHR018C_MUCL42920 | rna-NM_001179148.1_MUCL42920 | cds-NP_011882.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:139893-141284:- | gene-YHR018C_NCIM3186 | rna-NM_001179148.1_NCIM3186 | cds-NP_011882.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:127326-128717:- | gene-YHR018C_NCYC1407 | rna-NM_001179148.1_NCYC1407 | cds-NP_011882.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:129892-131283:- | gene-YHR018C_PE2H3 | rna-NM_001179148.1_PE2H3 | cds-NP_011882.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:137333-138724:- | gene-YHR018C_PE2H4 | rna-NM_001179148.1_PE2H4 | cds-NP_011882.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:140011-141402:- | gene-YHR018C_S288C | rna-NM_001179148.1_S288C | cds-NP_011882.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000075.1:5106-6497:+ | gene-YHR018C_SA1 | rna-NM_001179148.1_SA1 | cds-NP_011882.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:130166-131557:- | gene-YHR018C_ThermosaccDry | rna-NM_001179148.1_ThermosaccDry | cds-NP_011882.1_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:135964-137355:- | gene-YHR018C_VR1 | rna-NM_001179148.1_VR1 | cds-NP_011882.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:121403-122794:- | gene-YHR018C_ZTW1 | rna-NM_001179148.1_ZTW1 | cds-NP_011882.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:128287-129678:- | gene-YHR018C_Sparadoxus | rna-NM_001179148.1_Sparadoxus | cds-NP_011882.1_Sparadoxus | 91.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |