Gene name: ARG3
Reference locus (S288C): YJL088W
Gene biotype: protein_coding
Description: Ornithine carbamoyltransferase; also known as carbamoylphosphate:L-ornithine carbamoyltransferase; catalyzes the biosynthesis of the arginine precursor citrulline
Top 10 interactors (score): ARG1 (0.999); ARG5,6 (0.999); ARG4 (0.999); ARG8 (0.999); CAR1 (0.998); CAR2 (0.998); ARG7 (0.996); CPA1 (0.995); CPA2 (0.995); ARG2 (0.927); HSP60 (0.91); YFH1 (0.903); CYM1 (0.9); JAC1 (0.9); URA2 (0.896); URA3 (0.835); HIS1 (0.815); ORT1 (0.809); GLC3 (0.801); ARG81 (0.783)
Homologues (species, bitscore): OTC (Homo sapiens, 261.5); Otc (Mus musculus, 264.6); otc (Danio rerio, 260.8); otc (Xenopus tropicalis, 263.8); r (Drosophila melanogaster, 51.6); OTC (Arabidopsis thaliana, 179.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:251515-252531:+ | gene-YJL088W_AKU4011 | rna-NM_001181521.1_AKU4011 | cds-NP_012447.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:361923-362939:- | gene-YJL088W_BG1 | rna-NM_001181521.1_BG1 | cds-NP_012447.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:262960-263976:+ | gene-YJL088W_Bruggeman | rna-NM_001181521.1_Bruggeman | cds-NP_012447.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:267854-268870:+ | gene-YJL088W_CAT1 | rna-NM_001181521.1_CAT1 | cds-NP_012447.1_CAT1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:263176-264192:+ | gene-YJL088W_CBS1585 | rna-NM_001181521.1_CBS1585 | cds-NP_012447.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:281290-282306:+ | gene-YJL088W_CBS436 | rna-NM_001181521.1_CBS436 | cds-NP_012447.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:252273-253289:+ | gene-YJL088W_CBS6412 | rna-NM_001181521.1_CBS6412 | cds-NP_012447.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:253628-254644:+ | gene-YJL088W_CBS6413 | rna-NM_001181521.1_CBS6413 | cds-NP_012447.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:251264-252280:+ | gene-YJL088W_CENPK1137D | rna-NM_001181521.1_CENPK1137D | cds-NP_012447.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:255362-256378:+ | gene-YJL088W_EthanolRed | rna-NM_001181521.1_EthanolRed | cds-NP_012447.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:266935-267951:+ | gene-YJL088W_FaliES1 | rna-NM_001181521.1_FaliES1 | cds-NP_012447.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000138.1:64559-65575:+ | gene-YJL088W_JAY291 | rna-NM_001181521.1_JAY291 | cds-NP_012447.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:265231-266247:+ | gene-YJL088W_MUCL30387 | rna-NM_001181521.1_MUCL30387 | cds-NP_012447.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:261307-262323:+ | gene-YJL088W_MUCL30388 | rna-NM_001181521.1_MUCL30388 | cds-NP_012447.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:255933-256949:+ | gene-YJL088W_MUCL39482 | rna-NM_001181521.1_MUCL39482 | cds-NP_012447.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:262139-263155:+ | gene-YJL088W_MUCL42920 | rna-NM_001181521.1_MUCL42920 | cds-NP_012447.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:268778-269794:+ | gene-YJL088W_NCIM3186 | rna-NM_001181521.1_NCIM3186 | cds-NP_012447.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:254621-255637:+ | gene-YJL088W_NCYC1407 | rna-NM_001181521.1_NCYC1407 | cds-NP_012447.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:266985-268001:+ | gene-YJL088W_PE2H3 | rna-NM_001181521.1_PE2H3 | cds-NP_012447.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:266629-267645:+ | gene-YJL088W_PE2H4 | rna-NM_001181521.1_PE2H4 | cds-NP_012447.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:268799-269815:+ | gene-YJL088W_S288C | rna-NM_001181521.1_S288C | cds-NP_012447.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:64490-65506:+ | gene-YJL088W_SA1 | rna-NM_001181521.1_SA1 | cds-NP_012447.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:260348-261364:+ | gene-YJL088W_ThermosaccDry | rna-NM_001181521.1_ThermosaccDry | cds-NP_012447.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:261863-262879:+ | gene-YJL088W_VR1 | rna-NM_001181521.1_VR1 | cds-NP_012447.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:241708-242724:+ | gene-YJL088W_ZTW1 | rna-NM_001181521.1_ZTW1 | cds-NP_012447.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:265784-266800:+ | gene-YJL088W_Sparadoxus | rna-NM_001181521.1_Sparadoxus | cds-NP_012447.1_Sparadoxus | 90.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |