Gene name: ARF2
Reference locus (S288C): YDL137W
Gene biotype: protein_coding
Description: ADP-ribosylation factor; GTPase of the Ras superfamily involved in regulation of coated formation vesicles in intracellular trafficking within the Golgi; ARF2 has a paralog, ARF1, that arose from the whole genome duplication; arf1 arf2 double null mutation is complemented by human ARF1, ARF4, ARF5, or ARF6
Top 10 interactors (score): ARF1 (0.999); GLO3 (0.999); GEA1 (0.989); GEA2 (0.989); GCS1 (0.987); SEC7 (0.982); SPS18 (0.967); APL6 (0.964); SEC26 (0.947); SPO14 (0.946); PIK1 (0.939); GGA2 (0.938); SEC27 (0.935); SEC22 (0.921); GGA1 (0.92); SEC21 (0.917); ARF3 (0.916); USO1 (0.911); NMT1 (0.905); SYT1 (0.903)
Homologues (species, bitscore): ARF1 (Homo sapiens, 301.2); Arf2 (Mus musculus, 302.8); arf2 (Danio rerio, 302.4); arf1 (Xenopus tropicalis, 302.4); Arf79F (Drosophila melanogaster, 304.3); arf-1.2 (Caenorhabditis elegans, 305.8); ARFA1E (Arabidopsis thaliana, 308.5)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005298.1:200984-201529:+ | gene-YDL137W_AKU4011 | rna-NM_001180197.1_AKU4011 | cds-NP_010144.1_AKU4011 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000102.1:348251-348796:- | gene-YDL137W_BG1 | rna-NM_001180197.1_BG1 | cds-NP_010144.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005506.1:217232-217777:+ | gene-YDL137W_Bruggeman | rna-NM_001180197.1_Bruggeman | cds-NP_010144.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005522.1:121438-121983:+ | gene-YDL137W_CAT1 | rna-NM_001180197.1_CAT1 | cds-NP_010144.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005362.1:198935-199480:+ | gene-YDL137W_CBS1585 | rna-NM_001180197.1_CBS1585 | cds-NP_010144.1_CBS1585 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005346.1:215908-216453:+ | gene-YDL137W_CBS436 | rna-NM_001180197.1_CBS436 | cds-NP_010144.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005330.1:198237-198782:+ | gene-YDL137W_CBS6412 | rna-NM_001180197.1_CBS6412 | cds-NP_010144.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005314.1:217409-217954:+ | gene-YDL137W_CBS6413 | rna-NM_001180197.1_CBS6413 | cds-NP_010144.1_CBS6413 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001525.1:215179-215724:+ | gene-YDL137W_CENPK1137D | rna-NM_001180197.1_CENPK1137D | cds-NP_010144.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005474.1:212203-212748:+ | gene-YDL137W_EthanolRed | rna-NM_001180197.1_EthanolRed | cds-NP_010144.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005538.1:217735-218280:+ | gene-YDL137W_FaliES1 | rna-NM_001180197.1_FaliES1 | cds-NP_010144.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000032.1:1283-1828:- | gene-YDL137W_JAY291 | rna-NM_001180197.1_JAY291 | cds-NP_010144.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005410.1:216093-216638:+ | gene-YDL137W_MUCL30387 | rna-NM_001180197.1_MUCL30387 | cds-NP_010144.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005442.1:206960-207505:+ | gene-YDL137W_MUCL30388 | rna-NM_001180197.1_MUCL30388 | cds-NP_010144.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005282.1:200101-200646:+ | gene-YDL137W_MUCL39482 | rna-NM_001180197.1_MUCL39482 | cds-NP_010144.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | MBVV01000205.1:1221-1766:- | gene-YDL137W_MUCL42920 | rna-NM_001180197.1_MUCL42920 | cds-NP_010144.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011813.1:216452-216997:+ | gene-YDL137W_NCIM3186 | rna-NM_001180197.1_NCIM3186 | cds-NP_010144.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005266.1:200070-200615:+ | gene-YDL137W_NCYC1407 | rna-NM_001180197.1_NCYC1407 | cds-NP_010144.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994143.1:207333-207878:+ | gene-YDL137W_PE2H3 | rna-NM_001180197.1_PE2H3 | cds-NP_010144.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999875.1:207337-207882:+ | gene-YDL137W_PE2H4 | rna-NM_001180197.1_PE2H4 | cds-NP_010144.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001136.10:216529-217074:+ | gene-YDL137W_S288C | rna-NM_001180197.1_S288C | cds-NP_010144.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000043.1:82095-82640:+ | gene-YDL137W_SA1 | rna-NM_001180197.1_SA1 | cds-NP_010144.1_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005490.1:217496-218041:+ | gene-YDL137W_ThermosaccDry | rna-NM_001180197.1_ThermosaccDry | cds-NP_010144.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005458.1:219308-219853:+ | gene-YDL137W_VR1 | rna-NM_001180197.1_VR1 | cds-NP_010144.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000006.1:215613-216158:+ | gene-YDL137W_ZTW1 | rna-NM_001180197.1_ZTW1 | cds-NP_010144.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047490.1:217684-218229:+ | gene-YDL137W_Sparadoxus | rna-NM_001180197.1_Sparadoxus | cds-NP_010144.1_Sparadoxus | 94.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |