Gene name: ARC19
Reference locus (S288C): YKL013C
Gene biotype: protein_coding
Description: Subunit of the ARP2/3 complex; ARP2/3 is required for the motility and integrity of cortical actin patches; mutation is functionally complemented by human ARPC4
Top 10 interactors (score): ARC35 (0.999); ARC18 (0.999); ARC40 (0.999); ARP3 (0.999); LAS17 (0.999); ARP2 (0.999); ARC15 (0.999); LDB17 (0.968); SLA2 (0.948); ACT1 (0.898); PRE6 (0.893); ABP1 (0.815); MYO5 (0.809); BNR1 (0.8); VRP1 (0.793); COF1 (0.789); TWF1 (0.77); PFY1 (0.756); YGR201C (0.752); ARP1 (0.663)
Homologues (species, bitscore): ARPC4 (Homo sapiens, 228.4); Arpc4 (Mus musculus, 231.9); arpc4 (Danio rerio, 229.2); arpc4 (Xenopus tropicalis, 228.4); Arpc4 (Drosophila melanogaster, 227.3); arx-6 (Caenorhabditis elegans, 225.7); ARPC4 (Arabidopsis thaliana, 181.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005305.1:403526-404041:- | gene-YKL013C_AKU4011 | rna-NM_001179579.1_AKU4011 | cds-NP_012912.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000113.1:239862-240377:+ | gene-YKL013C_BG1 | rna-NM_001179579.1_BG1 | cds-NP_012912.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005513.1:425231-425746:- | gene-YKL013C_Bruggeman | rna-NM_001179579.1_Bruggeman | cds-NP_012912.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005529.1:420338-420853:- | gene-YKL013C_CAT1 | rna-NM_001179579.1_CAT1 | cds-NP_012912.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005369.1:416246-416761:- | gene-YKL013C_CBS1585 | rna-NM_001179579.1_CBS1585 | cds-NP_012912.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005353.1:415109-415624:- | gene-YKL013C_CBS436 | rna-NM_001179579.1_CBS436 | cds-NP_012912.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005337.1:400402-400917:- | gene-YKL013C_CBS6412 | rna-NM_001179579.1_CBS6412 | cds-NP_012912.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005321.1:416101-416616:- | gene-YKL013C_CBS6413 | rna-NM_001179579.1_CBS6413 | cds-NP_012912.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001532.1:417185-417700:- | gene-YKL013C_CENPK1137D | rna-NM_001179579.1_CENPK1137D | cds-NP_012912.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005481.1:414023-414538:- | gene-YKL013C_EthanolRed | rna-NM_001179579.1_EthanolRed | cds-NP_012912.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005545.1:416113-416628:- | gene-YKL013C_FaliES1 | rna-NM_001179579.1_FaliES1 | cds-NP_012912.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000142.1:14423-14938:+ | gene-YKL013C_JAY291 | rna-NM_001179579.1_JAY291 | cds-NP_012912.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005417.1:424546-425061:- | gene-YKL013C_MUCL30387 | rna-NM_001179579.1_MUCL30387 | cds-NP_012912.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005449.1:420155-420670:- | gene-YKL013C_MUCL30388 | rna-NM_001179579.1_MUCL30388 | cds-NP_012912.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005289.1:415563-416078:- | gene-YKL013C_MUCL39482 | rna-NM_001179579.1_MUCL39482 | cds-NP_012912.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005433.1:421392-421907:- | gene-YKL013C_MUCL42920 | rna-NM_001179579.1_MUCL42920 | cds-NP_012912.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011820.1:417497-418012:- | gene-YKL013C_NCIM3186 | rna-NM_001179579.1_NCIM3186 | cds-NP_012912.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005273.1:415755-416270:- | gene-YKL013C_NCYC1407 | rna-NM_001179579.1_NCYC1407 | cds-NP_012912.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994150.1:440446-440961:- | gene-YKL013C_PE2H3 | rna-NM_001179579.1_PE2H3 | cds-NP_012912.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999882.1:425188-425703:- | gene-YKL013C_PE2H4 | rna-NM_001179579.1_PE2H4 | cds-NP_012912.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001143.9:417508-418023:- | gene-YKL013C_S288C | rna-NM_001179579.1_S288C | cds-NP_012912.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000027.1:95790-96305:- | gene-YKL013C_SA1 | rna-NM_001179579.1_SA1 | cds-NP_012912.1_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005497.1:416212-416727:- | gene-YKL013C_ThermosaccDry | rna-NM_001179579.1_ThermosaccDry | cds-NP_012912.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005465.1:415468-415983:- | gene-YKL013C_VR1 | rna-NM_001179579.1_VR1 | cds-NP_012912.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000022.1:414240-414755:- | gene-YKL013C_ZTW1 | rna-NM_001179579.1_ZTW1 | cds-NP_012912.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047497.1:439215-439730:- | gene-YKL013C_Sparadoxus | rna-NM_001179579.1_Sparadoxus | cds-NP_012912.1_Sparadoxus | 94.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |