Gene name: ARC18
Reference locus (S288C): YLR370C
Gene biotype: protein_coding
Description: Actin related protein 2/3 complex, subunit 3; Subunit of the ARP2/3 complex; ARP2/3 is required for the motility and integrity of cortical actin patches
Top 10 interactors (score): ARP2 (0.999); LAS17 (0.999); ARP3 (0.999); ARC40 (0.999); ARC35 (0.999); ARC19 (0.999); ARC15 (0.999); LDB17 (0.968); ACT1 (0.968); SLA2 (0.967); PRE6 (0.934); PRE1 (0.929); PUP3 (0.926); CHC1 (0.905); VRP1 (0.9); MYO5 (0.899); BNI1 (0.883); ABP1 (0.862); CAP1 (0.852); BNR1 (0.851)
Homologues (species, bitscore): ARPC3 (Homo sapiens, 173.7); Arpc3 (Mus musculus, 174.5); arpc3 (Danio rerio, 171.0); arpc3 (Xenopus tropicalis, 162.2); Arpc3A (Drosophila melanogaster, 160.2); arx-5 (Caenorhabditis elegans, 142.5); ARPC3 (Arabidopsis thaliana, 132.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:811256-811792:- | gene-YLR370C_AKU4011 | rna-NM_001182259.3_AKU4011 | cds-NP_013474.3_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000048.1:43407-43943:- | gene-YLR370C_BG1 | rna-NM_001182259.3_BG1 | cds-NP_013474.3_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:849578-850114:- | gene-YLR370C_Bruggeman | rna-NM_001182259.3_Bruggeman | cds-NP_013474.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:845083-845619:- | gene-YLR370C_CAT1 | rna-NM_001182259.3_CAT1 | cds-NP_013474.3_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:846249-846785:- | gene-YLR370C_CBS1585 | rna-NM_001182259.3_CBS1585 | cds-NP_013474.3_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:830488-831024:- | gene-YLR370C_CBS436 | rna-NM_001182259.3_CBS436 | cds-NP_013474.3_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:883255-883791:- | gene-YLR370C_CBS6412 | rna-NM_001182259.3_CBS6412 | cds-NP_013474.3_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:847139-847675:- | gene-YLR370C_CBS6413 | rna-NM_001182259.3_CBS6413 | cds-NP_013474.3_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:846442-846978:- | gene-YLR370C_CENPK1137D | rna-NM_001182259.3_CENPK1137D | cds-NP_013474.3_CENPK1137D | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:803825-804361:- | gene-YLR370C_EthanolRed | rna-NM_001182259.3_EthanolRed | cds-NP_013474.3_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:832630-833166:- | gene-YLR370C_FaliES1 | rna-NM_001182259.3_FaliES1 | cds-NP_013474.3_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000161.1:43224-43760:- | gene-YLR370C_JAY291 | rna-NM_001182259.3_JAY291 | cds-NP_013474.3_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:846994-847530:- | gene-YLR370C_MUCL30387 | rna-NM_001182259.3_MUCL30387 | cds-NP_013474.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:852611-853147:- | gene-YLR370C_MUCL30388 | rna-NM_001182259.3_MUCL30388 | cds-NP_013474.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:847468-848004:- | gene-YLR370C_MUCL39482 | rna-NM_001182259.3_MUCL39482 | cds-NP_013474.3_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:842750-843286:- | gene-YLR370C_MUCL42920 | rna-NM_001182259.3_MUCL42920 | cds-NP_013474.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:861692-862228:- | gene-YLR370C_NCIM3186 | rna-NM_001182259.3_NCIM3186 | cds-NP_013474.3_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:856688-857224:- | gene-YLR370C_NCYC1407 | rna-NM_001182259.3_NCYC1407 | cds-NP_013474.3_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:843645-844181:- | gene-YLR370C_PE2H3 | rna-NM_001182259.3_PE2H3 | cds-NP_013474.3_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:843389-843925:- | gene-YLR370C_PE2H4 | rna-NM_001182259.3_PE2H4 | cds-NP_013474.3_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:861718-862254:- | gene-YLR370C_S288C | rna-NM_001182259.3_S288C | cds-NP_013474.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000007.1:186435-186971:+ | gene-YLR370C_SA1 | rna-NM_001182259.3_SA1 | cds-NP_013474.3_SA1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:835462-835998:- | gene-YLR370C_ThermosaccDry | rna-NM_001182259.3_ThermosaccDry | cds-NP_013474.3_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:848735-849271:- | gene-YLR370C_VR1 | rna-NM_001182259.3_VR1 | cds-NP_013474.3_VR1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000025.1:172912-173448:- | gene-YLR370C_ZTW1 | rna-NM_001182259.3_ZTW1 | cds-NP_013474.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:821616-822152:- | gene-YLR370C_Sparadoxus | rna-NM_001182259.3_Sparadoxus | cds-NP_013474.3_Sparadoxus | 92.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |