Gene name: ARC15
Reference locus (S288C): YIL062C
Gene biotype: protein_coding
Description: Subunit of the ARP2/3 complex; ARP2/3 is required for the motility and integrity of cortical actin patches; has mRNA binding activity; Belongs to the ARPC5 family
Top 10 interactors (score): ARP2 (0.999); ARP3 (0.999); ARC40 (0.999); ARC35 (0.999); ARC19 (0.999); ARC18 (0.999); LAS17 (0.995); LDB17 (0.967); SLA2 (0.935); MYO5 (0.916); CAP2 (0.916); SAC6 (0.915); ABP1 (0.915); ACT1 (0.905); VRP1 (0.871); CHC1 (0.865); CRN1 (0.848); GPI19 (0.821); PAN1 (0.82); MRPL9 (0.819)
Homologues (species, bitscore): ARPC5L (Homo sapiens, 63.5); Arpc5l (Mus musculus, 59.7); arpc5a (Danio rerio, 67.4); arpc5 (Xenopus tropicalis, 62.8); C46H11.3 (Caenorhabditis elegans, 52.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:240666-241130:- | gene-YIL062C_AKU4011 | rna-NM_001179412.1_AKU4011 | cds-NP_012202.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000164.1:102597-103061:- | gene-YIL062C_BG1 | rna-NM_001179412.1_BG1 | cds-NP_012202.1_BG1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:246081-246545:- | gene-YIL062C_Bruggeman | rna-NM_001179412.1_Bruggeman | cds-NP_012202.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:236356-236820:- | gene-YIL062C_CAT1 | rna-NM_001179412.1_CAT1 | cds-NP_012202.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:240237-240701:- | gene-YIL062C_CBS1585 | rna-NM_001179412.1_CBS1585 | cds-NP_012202.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:236284-236748:- | gene-YIL062C_CBS436 | rna-NM_001179412.1_CBS436 | cds-NP_012202.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:237612-238076:- | gene-YIL062C_CBS6412 | rna-NM_001179412.1_CBS6412 | cds-NP_012202.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:232157-232621:- | gene-YIL062C_CBS6413 | rna-NM_001179412.1_CBS6413 | cds-NP_012202.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:236047-236511:- | gene-YIL062C_CENPK1137D | rna-NM_001179412.1_CENPK1137D | cds-NP_012202.1_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:224966-225430:- | gene-YIL062C_EthanolRed | rna-NM_001179412.1_EthanolRed | cds-NP_012202.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:241869-242333:- | gene-YIL062C_FaliES1 | rna-NM_001179412.1_FaliES1 | cds-NP_012202.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000365.1:55799-56263:+ | gene-YIL062C_JAY291 | rna-NM_001179412.1_JAY291 | cds-NP_012202.1_JAY291 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:244301-244765:- | gene-YIL062C_MUCL30387 | rna-NM_001179412.1_MUCL30387 | cds-NP_012202.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:240906-241370:- | gene-YIL062C_MUCL30388 | rna-NM_001179412.1_MUCL30388 | cds-NP_012202.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:241083-241547:- | gene-YIL062C_MUCL39482 | rna-NM_001179412.1_MUCL39482 | cds-NP_012202.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:244450-244914:- | gene-YIL062C_MUCL42920 | rna-NM_001179412.1_MUCL42920 | cds-NP_012202.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:243998-244462:- | gene-YIL062C_NCIM3186 | rna-NM_001179412.1_NCIM3186 | cds-NP_012202.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:245359-245823:- | gene-YIL062C_NCYC1407 | rna-NM_001179412.1_NCYC1407 | cds-NP_012202.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:239339-239803:- | gene-YIL062C_PE2H3 | rna-NM_001179412.1_PE2H3 | cds-NP_012202.1_PE2H3 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:234057-234521:- | gene-YIL062C_PE2H4 | rna-NM_001179412.1_PE2H4 | cds-NP_012202.1_PE2H4 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:243998-244462:- | gene-YIL062C_S288C | rna-NM_001179412.1_S288C | cds-NP_012202.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000031.1:81379-81843:+ | gene-YIL062C_SA1 | rna-NM_001179412.1_SA1 | cds-NP_012202.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:240532-240996:- | gene-YIL062C_ThermosaccDry | rna-NM_001179412.1_ThermosaccDry | cds-NP_012202.1_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:238216-238680:- | gene-YIL062C_VR1 | rna-NM_001179412.1_VR1 | cds-NP_012202.1_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:214792-215256:- | gene-YIL062C_ZTW1 | rna-NM_001179412.1_ZTW1 | cds-NP_012202.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:238883-239347:- | gene-YIL062C_Sparadoxus | rna-NM_001179412.1_Sparadoxus | cds-NP_012202.1_Sparadoxus | 93.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |