Gene name: ARC1
Reference locus (S288C): YGL105W
Gene biotype: protein_coding
Description: tRNA-aminoacylation cofactor ARC1; Protein that binds tRNA and methionyl- and glutamyl-tRNA synthetases; involved in tRNA delivery, stimulating catalysis, and ensuring localization; also binds quadruplex nucleic acids; protein abundance increases in response to DNA replication stress; methionyl-tRNA synthetase is Mes1p; glutamyl-tRNA synthetase is Gus1p
Top 10 interactors (score): GLN4 (0.999); GUS1 (0.999); MES1 (0.999); YHR020W (0.998); CDC60 (0.998); ILS1 (0.997); DPS1 (0.996); MSM1 (0.993); KRS1 (0.989); TYS1 (0.966); VAS1 (0.956); MSE1 (0.941); NAM2 (0.931); YDR341C (0.924); MSK1 (0.917); LOS1 (0.913); HTS1 (0.909); LHP1 (0.903); RVB2 (0.878); KRR1 (0.877)
Homologues (species, bitscore): AIMP1 (Homo sapiens, 166.8); Aimp1 (Mus musculus, 165.6); aimp1 (Danio rerio, 175.6); aimp1 (Xenopus tropicalis, 169.9); CG8235 (Drosophila melanogaster, 148.3); mars-1 (Caenorhabditis elegans, 148.3); AT4G13780 (Arabidopsis thaliana, 147.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:310746-311876:+ | gene-YGL105W_AKU4011 | rna-NM_001180970.1_AKU4011 | cds-NP_011410.1_AKU4011 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:93834-94964:- | gene-YGL105W_BG1 | rna-NM_001180970.1_BG1 | cds-NP_011410.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:312905-314035:+ | gene-YGL105W_Bruggeman | rna-NM_001180970.1_Bruggeman | cds-NP_011410.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:308443-309573:+ | gene-YGL105W_CAT1 | rna-NM_001180970.1_CAT1 | cds-NP_011410.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:314070-315200:+ | gene-YGL105W_CBS1585 | rna-NM_001180970.1_CBS1585 | cds-NP_011410.1_CBS1585 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:308372-309502:+ | gene-YGL105W_CBS436 | rna-NM_001180970.1_CBS436 | cds-NP_011410.1_CBS436 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:298763-299893:+ | gene-YGL105W_CBS6412 | rna-NM_001180970.1_CBS6412 | cds-NP_011410.1_CBS6412 | 99.0 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:308368-309498:+ | gene-YGL105W_CBS6413 | rna-NM_001180970.1_CBS6413 | cds-NP_011410.1_CBS6413 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:307618-308748:+ | gene-YGL105W_CENPK1137D | rna-NM_001180970.1_CENPK1137D | cds-NP_011410.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:299817-300947:+ | gene-YGL105W_EthanolRed | rna-NM_001180970.1_EthanolRed | cds-NP_011410.1_EthanolRed | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:302372-303502:+ | gene-YGL105W_FaliES1 | rna-NM_001180970.1_FaliES1 | cds-NP_011410.1_FaliES1 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000046.1:43310-44440:- | gene-YGL105W_JAY291 | rna-NM_001180970.1_JAY291 | cds-NP_011410.1_JAY291 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:309875-311005:+ | gene-YGL105W_MUCL30387 | rna-NM_001180970.1_MUCL30387 | cds-NP_011410.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:312959-314089:+ | gene-YGL105W_MUCL30388 | rna-NM_001180970.1_MUCL30388 | cds-NP_011410.1_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:310583-311713:+ | gene-YGL105W_MUCL39482 | rna-NM_001180970.1_MUCL39482 | cds-NP_011410.1_MUCL39482 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:313857-314987:+ | gene-YGL105W_MUCL42920 | rna-NM_001180970.1_MUCL42920 | cds-NP_011410.1_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:307437-308567:+ | gene-YGL105W_NCIM3186 | rna-NM_001180970.1_NCIM3186 | cds-NP_011410.1_NCIM3186 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:302073-303203:+ | gene-YGL105W_NCYC1407 | rna-NM_001180970.1_NCYC1407 | cds-NP_011410.1_NCYC1407 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:303478-304608:+ | gene-YGL105W_PE2H3 | rna-NM_001180970.1_PE2H3 | cds-NP_011410.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:308476-309606:+ | gene-YGL105W_PE2H4 | rna-NM_001180970.1_PE2H4 | cds-NP_011410.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:307437-308567:+ | gene-YGL105W_S288C | rna-NM_001180970.1_S288C | cds-NP_011410.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000064.1:52222-53352:+ | gene-YGL105W_SA1 | rna-NM_001180970.1_SA1 | cds-NP_011410.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:302584-303714:+ | gene-YGL105W_ThermosaccDry | rna-NM_001180970.1_ThermosaccDry | cds-NP_011410.1_ThermosaccDry | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:412195-413325:+ | gene-YGL105W_VR1 | rna-NM_001180970.1_VR1 | cds-NP_011410.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:299983-301113:+ | gene-YGL105W_ZTW1 | rna-NM_001180970.1_ZTW1 | cds-NP_011410.1_ZTW1 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:306384-307514:+ | gene-YGL105W_Sparadoxus | rna-NM_001180970.1_Sparadoxus | cds-NP_011410.1_Sparadoxus | 94.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |