Gene name: ARA2
Reference locus (S288C): YMR041C
Gene biotype: protein_coding
Description: D-arabinose 1-dehydrogenase; NAD-dependent arabinose dehydrogenase; involved in biosynthesis of dehydro-D-arabinono-1,4-lactone; similar to plant L-galactose dehydrogenase; Belongs to the aldo/keto reductase family. Aldo/keto reductase 2 subfamily
Top 10 interactors (score): ALO1 (0.958); ARA1 (0.79); YDL086W (0.786); SEC53 (0.76); OXP1 (0.718); ECL1 (0.716); AKR2 (0.711); NNR2 (0.692); BFR1 (0.615); UBC8 (0.614); RPL34B (0.595); BNA1 (0.574); RPL16A (0.572); MRS3 (0.567); INM1 (0.54); INM2 (0.54); TRM9 (0.533); SMF3 (0.525); CCC2 (0.515); AKR1 (0.485)
Homologues (species, bitscore): CG18547 (Drosophila melanogaster, 136.0); mec-14 (Caenorhabditis elegans, 129.4); AT4G33670 (Arabidopsis thaliana, 139.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005307.1:400569-401576:- | gene-YMR041C_AKU4011 | rna-NM_001182538.1_AKU4011 | cds-NP_013755.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000201.1:141222-142229:+ | gene-YMR041C_BG1 | rna-NM_001182538.1_BG1 | cds-NP_013755.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005515.1:340504-341511:- | gene-YMR041C_Bruggeman | rna-NM_001182538.1_Bruggeman | cds-NP_013755.1_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005531.1:343031-344038:- | gene-YMR041C_CAT1 | rna-NM_001182538.1_CAT1 | cds-NP_013755.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005371.1:333511-334518:- | gene-YMR041C_CBS1585 | rna-NM_001182538.1_CBS1585 | cds-NP_013755.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005355.1:339048-340055:- | gene-YMR041C_CBS436 | rna-NM_001182538.1_CBS436 | cds-NP_013755.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005339.1:446912-447919:- | gene-YMR041C_CBS6412 | rna-NM_001182538.1_CBS6412 | cds-NP_013755.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005323.1:332766-333773:- | gene-YMR041C_CBS6413 | rna-NM_001182538.1_CBS6413 | cds-NP_013755.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001534.1:345688-346695:- | gene-YMR041C_CENPK1137D | rna-NM_001182538.1_CENPK1137D | cds-NP_013755.1_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005483.1:333342-334349:- | gene-YMR041C_EthanolRed | rna-NM_001182538.1_EthanolRed | cds-NP_013755.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005547.1:336524-337531:- | gene-YMR041C_FaliES1 | rna-NM_001182538.1_FaliES1 | cds-NP_013755.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000033.1:99418-100425:+ | gene-YMR041C_JAY291 | rna-NM_001182538.1_JAY291 | cds-NP_013755.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005419.1:338463-339470:- | gene-YMR041C_MUCL30387 | rna-NM_001182538.1_MUCL30387 | cds-NP_013755.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005451.1:343119-344126:- | gene-YMR041C_MUCL30388 | rna-NM_001182538.1_MUCL30388 | cds-NP_013755.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005291.1:333793-334800:- | gene-YMR041C_MUCL39482 | rna-NM_001182538.1_MUCL39482 | cds-NP_013755.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005435.1:339607-340614:- | gene-YMR041C_MUCL42920 | rna-NM_001182538.1_MUCL42920 | cds-NP_013755.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011822.1:350920-351927:- | gene-YMR041C_NCIM3186 | rna-NM_001182538.1_NCIM3186 | cds-NP_013755.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005275.1:333710-334717:- | gene-YMR041C_NCYC1407 | rna-NM_001182538.1_NCYC1407 | cds-NP_013755.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994152.1:339648-340655:- | gene-YMR041C_PE2H3 | rna-NM_001182538.1_PE2H3 | cds-NP_013755.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999884.1:345743-346750:- | gene-YMR041C_PE2H4 | rna-NM_001182538.1_PE2H4 | cds-NP_013755.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001145.3:350966-351973:- | gene-YMR041C_S288C | rna-NM_001182538.1_S288C | cds-NP_013755.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:186286-187293:+ | gene-YMR041C_SA1 | rna-NM_001182538.1_SA1 | cds-NP_013755.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005499.1:333593-334600:- | gene-YMR041C_ThermosaccDry | rna-NM_001182538.1_ThermosaccDry | cds-NP_013755.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005467.1:338293-339300:- | gene-YMR041C_VR1 | rna-NM_001182538.1_VR1 | cds-NP_013755.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000027.1:312601-313608:- | gene-YMR041C_ZTW1 | rna-NM_001182538.1_ZTW1 | cds-NP_013755.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047499.1:346490-347497:- | gene-YMR041C_Sparadoxus | rna-NM_001182538.1_Sparadoxus | cds-NP_013755.1_Sparadoxus | 88.6 | 100.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |