Gene name: ARA1
Reference locus (S288C): YBR149W
Gene biotype: protein_coding
Description: D-arabinose dehydrogenase [NAD(P)+] heavy chain; NADP+ dependent arabinose dehydrogenase; involved in carbohydrate metabolism; purified as homodimer; naturally occurs with a N-terminus degradation product; Belongs to the aldo/keto reductase family
Top 10 interactors (score): ALO1 (0.905); YBR053C (0.904); PGM2 (0.885); STF2 (0.81); TFS1 (0.797); PNC1 (0.795); ARA2 (0.79); DCS1 (0.784); GAD1 (0.782); GRE3 (0.755); MSC1 (0.744); YBR139W (0.732); GLK1 (0.706); TPS1 (0.686); HFD1 (0.644); TSL1 (0.637); YSA1 (0.631); PRX1 (0.624); GUT2 (0.619); YBR056W (0.613)
Homologues (species, bitscore): AKR1B10 (Homo sapiens, 192.2); Akr1b10 (Mus musculus, 196.1); akr1b1.2 (Danio rerio, 186.8); akr1a1 (Xenopus tropicalis, 168.7); CG6084 (Drosophila melanogaster, 193.0); Y39G8B.1 (Caenorhabditis elegans, 183.3); ChlAKR (Arabidopsis thaliana, 178.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:522913-523947:+ | gene-YBR149W_AKU4011 | rna-NM_001178497.3_AKU4011 | cds-NP_009707.3_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:513478-514512:+ | gene-YBR149W_BG1 | rna-NM_001178497.3_BG1 | cds-NP_009707.3_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:525703-526737:+ | gene-YBR149W_Bruggeman | rna-NM_001178497.3_Bruggeman | cds-NP_009707.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:420052-421086:+ | gene-YBR149W_CAT1 | rna-NM_001178497.3_CAT1 | cds-NP_009707.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:514692-515726:+ | gene-YBR149W_CBS1585 | rna-NM_001178497.3_CBS1585 | cds-NP_009707.3_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:522789-523823:+ | gene-YBR149W_CBS436 | rna-NM_001178497.3_CBS436 | cds-NP_009707.3_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:612558-613592:+ | gene-YBR149W_CBS6412 | rna-NM_001178497.3_CBS6412 | cds-NP_009707.3_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:520327-521361:+ | gene-YBR149W_CBS6413 | rna-NM_001178497.3_CBS6413 | cds-NP_009707.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:533755-534789:+ | gene-YBR149W_CENPK1137D | rna-NM_001178497.3_CENPK1137D | cds-NP_009707.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:648933-649967:+ | gene-YBR149W_EthanolRed | rna-NM_001178497.3_EthanolRed | cds-NP_009707.3_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:538945-539979:+ | gene-YBR149W_FaliES1 | rna-NM_001178497.3_FaliES1 | cds-NP_009707.3_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000444.1:62389-63423:+ | gene-YBR149W_JAY291 | rna-NM_001178497.3_JAY291 | cds-NP_009707.3_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:527573-528607:+ | gene-YBR149W_MUCL30387 | rna-NM_001178497.3_MUCL30387 | cds-NP_009707.3_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:526866-527900:+ | gene-YBR149W_MUCL30388 | rna-NM_001178497.3_MUCL30388 | cds-NP_009707.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:513079-514113:+ | gene-YBR149W_MUCL39482 | rna-NM_001178497.3_MUCL39482 | cds-NP_009707.3_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:522973-524007:+ | gene-YBR149W_MUCL42920 | rna-NM_001178497.3_MUCL42920 | cds-NP_009707.3_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:539784-540818:+ | gene-YBR149W_NCIM3186 | rna-NM_001178497.3_NCIM3186 | cds-NP_009707.3_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:515620-516654:+ | gene-YBR149W_NCYC1407 | rna-NM_001178497.3_NCYC1407 | cds-NP_009707.3_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:528236-529270:+ | gene-YBR149W_PE2H3 | rna-NM_001178497.3_PE2H3 | cds-NP_009707.3_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:525912-526946:+ | gene-YBR149W_PE2H4 | rna-NM_001178497.3_PE2H4 | cds-NP_009707.3_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:539987-541021:+ | gene-YBR149W_S288C | rna-NM_001178497.3_S288C | cds-NP_009707.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000032.1:61204-62238:+ | gene-YBR149W_SA1 | rna-NM_001178497.3_SA1 | cds-NP_009707.3_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:537958-538992:+ | gene-YBR149W_ThermosaccDry | rna-NM_001178497.3_ThermosaccDry | cds-NP_009707.3_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:519453-520487:+ | gene-YBR149W_VR1 | rna-NM_001178497.3_VR1 | cds-NP_009707.3_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:513104-514138:+ | gene-YBR149W_ZTW1 | rna-NM_001178497.3_ZTW1 | cds-NP_009707.3_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:550358-551392:+ | gene-YBR149W_Sparadoxus | rna-NM_001178497.3_Sparadoxus | cds-NP_009707.3_Sparadoxus | 92.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |