Gene name: APM2
Reference locus (S288C): YHL019C
Gene biotype: protein_coding
Description: Protein of unknown function; homologous to the medium chain of mammalian clathrin-associated protein complex; involved in vesicular transport; Belongs to the adaptor complexes medium subunit family
Top 10 interactors (score): APL4 (0.999); APL2 (0.996); APS1 (0.986); APL6 (0.948); APL3 (0.93); APL5 (0.925); APM3 (0.907); APL1 (0.903); APS2 (0.901); CHC1 (0.9); APS3 (0.89); CLC1 (0.867); APM4 (0.826); LAA1 (0.793); OMS1 (0.777); ENT3 (0.76); ENT5 (0.76); PUS4 (0.75); SYF1 (0.739); APM1 (0.72)
Homologues (species, bitscore): AP1M2 (Homo sapiens, 141.7); Ap1m2 (Mus musculus, 137.5); ap1m2 (Danio rerio, 136.0); ap1m1 (Xenopus tropicalis, 140.2); AP-1mu (Drosophila melanogaster, 143.3); dpy-23 (Caenorhabditis elegans, 127.1); HAP13 (Arabidopsis thaliana, 121.3)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005302.1:62682-64499:- | gene-YHL019C_AKU4011 | rna-NM_001179099.1_AKU4011 | cds-NP_011844.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000180.1:12309-14126:+ | gene-YHL019C_BG1 | rna-NM_001179099.1_BG1 | cds-NP_011844.1_BG1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005510.1:69316-71133:- | gene-YHL019C_Bruggeman | rna-NM_001179099.1_Bruggeman | cds-NP_011844.1_Bruggeman | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005526.1:63529-65346:- | gene-YHL019C_CAT1 | rna-NM_001179099.1_CAT1 | cds-NP_011844.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005366.1:63277-65094:- | gene-YHL019C_CBS1585 | rna-NM_001179099.1_CBS1585 | cds-NP_011844.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005350.1:55784-57601:- | gene-YHL019C_CBS436 | rna-NM_001179099.1_CBS436 | cds-NP_011844.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005334.1:63227-65044:- | gene-YHL019C_CBS6412 | rna-NM_001179099.1_CBS6412 | cds-NP_011844.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005318.1:62656-64473:- | gene-YHL019C_CBS6413 | rna-NM_001179099.1_CBS6413 | cds-NP_011844.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001529.1:60892-62709:- | gene-YHL019C_CENPK1137D | rna-NM_001179099.1_CENPK1137D | cds-NP_011844.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005478.1:62904-64721:- | gene-YHL019C_EthanolRed | rna-NM_001179099.1_EthanolRed | cds-NP_011844.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005542.1:63220-65037:- | gene-YHL019C_FaliES1 | rna-NM_001179099.1_FaliES1 | cds-NP_011844.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000003.1:31891-33708:- | gene-YHL019C_JAY291 | rna-NM_001179099.1_JAY291 | cds-NP_011844.1_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005414.1:66305-68122:- | gene-YHL019C_MUCL30387 | rna-NM_001179099.1_MUCL30387 | cds-NP_011844.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005446.1:67001-68818:- | gene-YHL019C_MUCL30388 | rna-NM_001179099.1_MUCL30388 | cds-NP_011844.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005286.1:62262-64079:- | gene-YHL019C_MUCL39482 | rna-NM_001179099.1_MUCL39482 | cds-NP_011844.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005430.1:66220-68037:- | gene-YHL019C_MUCL42920 | rna-NM_001179099.1_MUCL42920 | cds-NP_011844.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011817.1:67613-69430:- | gene-YHL019C_NCIM3186 | rna-NM_001179099.1_NCIM3186 | cds-NP_011844.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005270.1:61723-63540:- | gene-YHL019C_NCYC1407 | rna-NM_001179099.1_NCYC1407 | cds-NP_011844.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994147.1:57964-59781:- | gene-YHL019C_PE2H3 | rna-NM_001179099.1_PE2H3 | cds-NP_011844.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999879.1:65405-67222:- | gene-YHL019C_PE2H4 | rna-NM_001179099.1_PE2H4 | cds-NP_011844.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001140.6:67731-69548:- | gene-YHL019C_S288C | rna-NM_001179099.1_S288C | cds-NP_011844.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000005.1:52063-53880:- | gene-YHL019C_SA1 | rna-NM_001179099.1_SA1 | cds-NP_011844.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005494.1:64315-66132:- | gene-YHL019C_ThermosaccDry | rna-NM_001179099.1_ThermosaccDry | cds-NP_011844.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005462.1:69049-70866:- | gene-YHL019C_VR1 | rna-NM_001179099.1_VR1 | cds-NP_011844.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000017.1:55490-57307:- | gene-YHL019C_ZTW1 | rna-NM_001179099.1_ZTW1 | cds-NP_011844.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047494.1:61801-63627:- | gene-YHL019C_Sparadoxus | rna-NM_001179099.1_Sparadoxus | cds-NP_011844.1_Sparadoxus | 89.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |