Gene name: APL5
Reference locus (S288C): YPL195W
Gene biotype: protein_coding
Description: Delta adaptin-like subunit of the clathrin associated protein complex; functions in transport of alkaline phosphatase to the vacuole via the alternate pathway; suppressor of loss of casein kinase 1 function; the clathrin associated protein complex is also known as AP-3
Top 10 interactors (score): APS3 (0.999); APM3 (0.999); APL6 (0.999); APM4 (0.967); VPS41 (0.961); APS2 (0.928); APM2 (0.925); APL1 (0.913); APL3 (0.909); APM1 (0.874); COS111 (0.861); APL2 (0.861); VAM3 (0.86); APL4 (0.857); APS1 (0.852); NYV1 (0.84); VAM6 (0.823); SEC26 (0.814); ENT4 (0.808); PEP8 (0.791)
Homologues (species, bitscore): AP3D1 (Homo sapiens, 381.7); Ap3d1 (Mus musculus, 386.7); ap3d1 (Danio rerio, 377.9); ap3d1 (Xenopus tropicalis, 383.6); g (Drosophila melanogaster, 379.0); apd-3 (Caenorhabditis elegans, 368.2); delta-ADR (Arabidopsis thaliana, 275.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:154070-156868:+ | gene-YPL195W_AKU4011 | rna-NM_001184009.1_AKU4011 | cds-NP_015129.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000069.1:359861-362659:+ | gene-YPL195W_BG1 | rna-NM_001184009.1_BG1 | cds-NP_015129.1_BG1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:180057-182855:+ | gene-YPL195W_Bruggeman | rna-NM_001184009.1_Bruggeman | cds-NP_015129.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:176412-179210:+ | gene-YPL195W_CAT1 | rna-NM_001184009.1_CAT1 | cds-NP_015129.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:158260-161058:+ | gene-YPL195W_CBS1585 | rna-NM_001184009.1_CBS1585 | cds-NP_015129.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:172952-175750:+ | gene-YPL195W_CBS436 | rna-NM_001184009.1_CBS436 | cds-NP_015129.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:163059-165857:+ | gene-YPL195W_CBS6412 | rna-NM_001184009.1_CBS6412 | cds-NP_015129.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:154431-157229:+ | gene-YPL195W_CBS6413 | rna-NM_001184009.1_CBS6413 | cds-NP_015129.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:176170-178968:+ | gene-YPL195W_CENPK1137D | rna-NM_001184009.1_CENPK1137D | cds-NP_015129.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:153189-155987:+ | gene-YPL195W_EthanolRed | rna-NM_001184009.1_EthanolRed | cds-NP_015129.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:160560-163358:+ | gene-YPL195W_FaliES1 | rna-NM_001184009.1_FaliES1 | cds-NP_015129.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000267.1:1590-4388:+ | gene-YPL195W_JAY291 | rna-NM_001184009.1_JAY291 | cds-NP_015129.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:171444-174242:+ | gene-YPL195W_MUCL30387 | rna-NM_001184009.1_MUCL30387 | cds-NP_015129.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:169599-172397:+ | gene-YPL195W_MUCL30388 | rna-NM_001184009.1_MUCL30388 | cds-NP_015129.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:151589-154387:+ | gene-YPL195W_MUCL39482 | rna-NM_001184009.1_MUCL39482 | cds-NP_015129.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:208432-211230:+ | gene-YPL195W_MUCL42920 | rna-NM_001184009.1_MUCL42920 | cds-NP_015129.1_MUCL42920 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:176206-179004:+ | gene-YPL195W_NCIM3186 | rna-NM_001184009.1_NCIM3186 | cds-NP_015129.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:157955-160753:+ | gene-YPL195W_NCYC1407 | rna-NM_001184009.1_NCYC1407 | cds-NP_015129.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:165573-168371:+ | gene-YPL195W_PE2H3 | rna-NM_001184009.1_PE2H3 | cds-NP_015129.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:165216-168014:+ | gene-YPL195W_PE2H4 | rna-NM_001184009.1_PE2H4 | cds-NP_015129.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:176223-179021:+ | gene-YPL195W_S288C | rna-NM_001184009.1_S288C | cds-NP_015129.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000012.1:194330-197128:- | gene-YPL195W_SA1 | rna-NM_001184009.1_SA1 | cds-NP_015129.1_SA1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:160339-163137:+ | gene-YPL195W_ThermosaccDry | rna-NM_001184009.1_ThermosaccDry | cds-NP_015129.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:175346-178144:+ | gene-YPL195W_VR1 | rna-NM_001184009.1_VR1 | cds-NP_015129.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:159694-162492:+ | gene-YPL195W_ZTW1 | rna-NM_001184009.1_ZTW1 | cds-NP_015129.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:161250-164045:+ | gene-YPL195W_Sparadoxus | rna-NM_001184009.1_Sparadoxus | cds-NP_015129.1_Sparadoxus | 89.3 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |