Gene name: APL3
Reference locus (S288C): YBL037W
Gene biotype: protein_coding
Description: Alpha-adaptin; large subunit of the clathrin associated protein complex (AP-2); involved in vesicle mediated transport
Top 10 interactors (score): CHC1 (0.999); APM4 (0.999); APS2 (0.999); EDE1 (0.999); APL1 (0.999); APL2 (0.996); ENT1 (0.994); ENT2 (0.994); CLC1 (0.992); PAN1 (0.989); YAP1801 (0.986); APL4 (0.983); END3 (0.981); YAP1802 (0.981); RVS161 (0.981); SEC16 (0.977); ENT3 (0.975); ENT5 (0.974); VPS1 (0.954); DNM1 (0.952)
Homologues (species, bitscore): AP2A2 (Homo sapiens, 278.9); Ap2a2 (Mus musculus, 281.6); ap2a1 (Danio rerio, 264.2); ap2a1 (Xenopus tropicalis, 270.0); AP-2alpha (Drosophila melanogaster, 250.0); apa-2 (Caenorhabditis elegans, 247.3); alpha-ADR (Arabidopsis thaliana, 222.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:140826-143903:+ | gene-YBL037W_AKU4011 | rna-NM_001178277.1_AKU4011 | cds-NP_009516.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:131636-134713:+ | gene-YBL037W_BG1 | rna-NM_001178277.1_BG1 | cds-NP_009516.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:141405-144482:+ | gene-YBL037W_Bruggeman | rna-NM_001178277.1_Bruggeman | cds-NP_009516.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:144032-147109:+ | gene-YBL037W_CAT1 | rna-NM_001178277.1_CAT1 | cds-NP_009516.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:133365-136442:+ | gene-YBL037W_CBS1585 | rna-NM_001178277.1_CBS1585 | cds-NP_009516.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:141867-144944:+ | gene-YBL037W_CBS436 | rna-NM_001178277.1_CBS436 | cds-NP_009516.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:232119-235196:+ | gene-YBL037W_CBS6412 | rna-NM_001178277.1_CBS6412 | cds-NP_009516.1_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:138936-142013:+ | gene-YBL037W_CBS6413 | rna-NM_001178277.1_CBS6413 | cds-NP_009516.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:140960-144037:+ | gene-YBL037W_CENPK1137D | rna-NM_001178277.1_CENPK1137D | cds-NP_009516.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:154786-157863:+ | gene-YBL037W_EthanolRed | rna-NM_001178277.1_EthanolRed | cds-NP_009516.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:155633-158710:+ | gene-YBL037W_FaliES1 | rna-NM_001178277.1_FaliES1 | cds-NP_009516.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000072.1:58260-61337:+ | gene-YBL037W_JAY291 | rna-NM_001178277.1_JAY291 | cds-NP_009516.1_JAY291 | 99.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:140781-143858:+ | gene-YBL037W_MUCL30387 | rna-NM_001178277.1_MUCL30387 | cds-NP_009516.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:142055-145132:+ | gene-YBL037W_MUCL30388 | rna-NM_001178277.1_MUCL30388 | cds-NP_009516.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:133540-136617:+ | gene-YBL037W_MUCL39482 | rna-NM_001178277.1_MUCL39482 | cds-NP_009516.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:140366-143443:+ | gene-YBL037W_MUCL42920 | rna-NM_001178277.1_MUCL42920 | cds-NP_009516.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:147006-150083:+ | gene-YBL037W_NCIM3186 | rna-NM_001178277.1_NCIM3186 | cds-NP_009516.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:134677-137754:+ | gene-YBL037W_NCYC1407 | rna-NM_001178277.1_NCYC1407 | cds-NP_009516.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:140937-144014:+ | gene-YBL037W_PE2H3 | rna-NM_001178277.1_PE2H3 | cds-NP_009516.1_PE2H3 | 99.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:138581-141658:+ | gene-YBL037W_PE2H4 | rna-NM_001178277.1_PE2H4 | cds-NP_009516.1_PE2H4 | 99.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:147209-150286:+ | gene-YBL037W_S288C | rna-NM_001178277.1_S288C | cds-NP_009516.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000051.1:31788-34865:+ | gene-YBL037W_SA1 | rna-NM_001178277.1_SA1 | cds-NP_009516.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:155586-158663:+ | gene-YBL037W_ThermosaccDry | rna-NM_001178277.1_ThermosaccDry | cds-NP_009516.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:137766-140843:+ | gene-YBL037W_VR1 | rna-NM_001178277.1_VR1 | cds-NP_009516.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:132301-135378:+ | gene-YBL037W_ZTW1 | rna-NM_001178277.1_ZTW1 | cds-NP_009516.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:167180-170257:+ | gene-YBL037W_Sparadoxus | rna-NM_001178277.1_Sparadoxus | cds-NP_009516.1_Sparadoxus | 89.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |