Gene name: APJ1
Reference locus (S288C): YNL077W
Gene biotype: protein_coding
Description: J domain-containing protein APJ1; Chaperone with a role in SUMO-mediated protein degradation; member of the DnaJ-like family; conserved across eukaryotes; overexpression interferes with propagation of the [Psi+] prion; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; forms nuclear foci upon DNA replication stress
Top 10 interactors (score): SSA4 (0.97); SSA1 (0.967); SSA2 (0.954); BTN2 (0.952); SSA3 (0.948); STI1 (0.942); SSE2 (0.91); SSE1 (0.909); JEM1 (0.886); HSC82 (0.865); HSP82 (0.853); JJJ3 (0.845); JJJ2 (0.845); KAR2 (0.845); ERJ5 (0.843); ZUO1 (0.842); SWA2 (0.839); HSP104 (0.838); CWC23 (0.837); JAC1 (0.834)
Homologues (species, bitscore): DNAJA2 (Homo sapiens, 201.8); Dnaja2 (Mus musculus, 199.9); dnaja2l (Danio rerio, 193.0); dnaja2 (Xenopus tropicalis, 193.0); Droj2 (Drosophila melanogaster, 177.6); dnj-12 (Caenorhabditis elegans, 187.2); J2 (Arabidopsis thaliana, 204.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:475061-476647:+ | gene-YNL077W_AKU4011 | rna-NM_001182915.1_AKU4011 | cds-NP_014322.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:379088-380674:+ | gene-YNL077W_BG1 | rna-NM_001182915.1_BG1 | cds-NP_014322.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:485789-487375:+ | gene-YNL077W_Bruggeman | rna-NM_001182915.1_Bruggeman | cds-NP_014322.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:528785-530371:+ | gene-YNL077W_CAT1 | rna-NM_001182915.1_CAT1 | cds-NP_014322.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:475729-477315:+ | gene-YNL077W_CBS1585 | rna-NM_001182915.1_CBS1585 | cds-NP_014322.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:544143-545729:+ | gene-YNL077W_CBS436 | rna-NM_001182915.1_CBS436 | cds-NP_014322.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:470823-472409:+ | gene-YNL077W_CBS6412 | rna-NM_001182915.1_CBS6412 | cds-NP_014322.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:472140-473726:+ | gene-YNL077W_CBS6413 | rna-NM_001182915.1_CBS6413 | cds-NP_014322.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:475249-476835:+ | gene-YNL077W_CENPK1137D | rna-NM_001182915.1_CENPK1137D | cds-NP_014322.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:477883-479469:+ | gene-YNL077W_EthanolRed | rna-NM_001182915.1_EthanolRed | cds-NP_014322.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:468407-469993:+ | gene-YNL077W_FaliES1 | rna-NM_001182915.1_FaliES1 | cds-NP_014322.1_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000317.1:3600-5186:- | gene-YNL077W_JAY291 | rna-NM_001182915.1_JAY291 | cds-NP_014322.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:481953-483539:+ | gene-YNL077W_MUCL30387 | rna-NM_001182915.1_MUCL30387 | cds-NP_014322.1_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:517350-518936:+ | gene-YNL077W_MUCL30388 | rna-NM_001182915.1_MUCL30388 | cds-NP_014322.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:473132-474718:+ | gene-YNL077W_MUCL39482 | rna-NM_001182915.1_MUCL39482 | cds-NP_014322.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:477060-478646:+ | gene-YNL077W_MUCL42920 | rna-NM_001182915.1_MUCL42920 | cds-NP_014322.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:481360-482946:+ | gene-YNL077W_NCIM3186 | rna-NM_001182915.1_NCIM3186 | cds-NP_014322.1_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:475182-476768:+ | gene-YNL077W_NCYC1407 | rna-NM_001182915.1_NCYC1407 | cds-NP_014322.1_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:478418-480004:+ | gene-YNL077W_PE2H3 | rna-NM_001182915.1_PE2H3 | cds-NP_014322.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:473493-475079:+ | gene-YNL077W_PE2H4 | rna-NM_001182915.1_PE2H4 | cds-NP_014322.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:481391-482977:+ | gene-YNL077W_S288C | rna-NM_001182915.1_S288C | cds-NP_014322.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000024.1:66344-67930:+ | gene-YNL077W_SA1 | rna-NM_001182915.1_SA1 | cds-NP_014322.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:469283-470869:+ | gene-YNL077W_ThermosaccDry | rna-NM_001182915.1_ThermosaccDry | cds-NP_014322.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:488401-489987:+ | gene-YNL077W_VR1 | rna-NM_001182915.1_VR1 | cds-NP_014322.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:378633-380219:+ | gene-YNL077W_ZTW1 | rna-NM_001182915.1_ZTW1 | cds-NP_014322.1_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:484796-486385:+ | gene-YNL077W_Sparadoxus | rna-NM_001182915.1_Sparadoxus | cds-NP_014322.1_Sparadoxus | 89.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |