Gene name: APE3
Reference locus (S288C): YBR286W
Gene biotype: protein_coding
Description: Vacuolar aminopeptidase Y; processed to mature form by Prb1p
Top 10 interactors (score): PFF1 (0.864); DAP2 (0.821); TUF1 (0.806); APE2 (0.79); PEP4 (0.745); PRB1 (0.736); ICP55 (0.721); CPS1 (0.717); MSC2 (0.691); PRC1 (0.658); APE1 (0.651); TFA1 (0.645); PDI1 (0.636); IDH2 (0.586); QCR2 (0.577); YGL242C (0.564); PEP1 (0.562); YDR132C (0.562); MPO1 (0.553); YDL109C (0.553)
Homologues (species, bitscore): NAALADL1 (Homo sapiens, 52.4); Naaladl1 (Mus musculus, 52.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:759002-760615:+ | gene-YBR286W_AKU4011 | rna-NM_001178634.1_AKU4011 | cds-NP_009845.2_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000066.1:129995-131608:+ | gene-YBR286W_BG1 | rna-NM_001178634.1_BG1 | cds-NP_009845.2_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:760132-761745:+ | gene-YBR286W_Bruggeman | rna-NM_001178634.1_Bruggeman | cds-NP_009845.2_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:763858-765471:+ | gene-YBR286W_CAT1 | rna-NM_001178634.1_CAT1 | cds-NP_009845.2_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:750568-752181:+ | gene-YBR286W_CBS1585 | rna-NM_001178634.1_CBS1585 | cds-NP_009845.2_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:756982-758595:+ | gene-YBR286W_CBS436 | rna-NM_001178634.1_CBS436 | cds-NP_009845.2_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:845182-846795:+ | gene-YBR286W_CBS6412 | rna-NM_001178634.1_CBS6412 | cds-NP_009845.2_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:756617-758230:+ | gene-YBR286W_CBS6413 | rna-NM_001178634.1_CBS6413 | cds-NP_009845.2_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:768599-770212:+ | gene-YBR286W_CENPK1137D | rna-NM_001178634.1_CENPK1137D | cds-NP_009845.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:882040-883653:+ | gene-YBR286W_EthanolRed | rna-NM_001178634.1_EthanolRed | cds-NP_009845.2_EthanolRed | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:775387-777000:+ | gene-YBR286W_FaliES1 | rna-NM_001178634.1_FaliES1 | cds-NP_009845.2_FaliES1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000067.1:27094-28707:- | gene-YBR286W_JAY291 | rna-NM_001178634.1_JAY291 | cds-NP_009845.2_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:762175-763788:+ | gene-YBR286W_MUCL30387 | rna-NM_001178634.1_MUCL30387 | cds-NP_009845.2_MUCL30387 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:779256-780869:+ | gene-YBR286W_MUCL30388 | rna-NM_001178634.1_MUCL30388 | cds-NP_009845.2_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:748875-750488:+ | gene-YBR286W_MUCL39482 | rna-NM_001178634.1_MUCL39482 | cds-NP_009845.2_MUCL39482 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:758721-760334:+ | gene-YBR286W_MUCL42920 | rna-NM_001178634.1_MUCL42920 | cds-NP_009845.2_MUCL42920 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:774497-776110:+ | gene-YBR286W_NCIM3186 | rna-NM_001178634.1_NCIM3186 | cds-NP_009845.2_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:750765-752378:+ | gene-YBR286W_NCYC1407 | rna-NM_001178634.1_NCYC1407 | cds-NP_009845.2_NCYC1407 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:773860-775473:+ | gene-YBR286W_PE2H3 | rna-NM_001178634.1_PE2H3 | cds-NP_009845.2_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:771536-773149:+ | gene-YBR286W_PE2H4 | rna-NM_001178634.1_PE2H4 | cds-NP_009845.2_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:774700-776313:+ | gene-YBR286W_S288C | rna-NM_001178634.1_S288C | cds-NP_009845.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000019.1:129815-131428:+ | gene-YBR286W_SA1 | rna-NM_001178634.1_SA1 | cds-NP_009845.2_SA1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:774379-775992:+ | gene-YBR286W_ThermosaccDry | rna-NM_001178634.1_ThermosaccDry | cds-NP_009845.2_ThermosaccDry | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:754560-756173:+ | gene-YBR286W_VR1 | rna-NM_001178634.1_VR1 | cds-NP_009845.2_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:747215-748828:+ | gene-YBR286W_ZTW1 | rna-NM_001178634.1_ZTW1 | cds-NP_009845.2_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:791067-792680:+ | gene-YBR286W_Sparadoxus | rna-NM_001178634.1_Sparadoxus | cds-NP_009845.2_Sparadoxus | 90.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |