Gene name: APD1
Reference locus (S288C): YBR151W
Gene biotype: protein_coding
Description: Actin patches distal protein 1; Protein of unknown function; required for normal localization of actin patches and for normal tolerance of sodium ions and hydrogen peroxide; localizes to both cytoplasm and nucleus; Belongs to the APD1 family
Top 10 interactors (score): YDR102C (0.766); OSW7 (0.69); YBR144C (0.673); YBR137W (0.671); YOR012W (0.67); PET117 (0.65); TMN3 (0.65); PUG1 (0.614); FMP46 (0.612); BMT2 (0.61); MSD1 (0.6); TPT1 (0.574); CBP2 (0.573); MRX1 (0.573); MNE1 (0.573); MSE1 (0.57); MTG2 (0.57); MSM1 (0.561); YBP1 (0.535); HER2 (0.526)
Homologues (species, bitscore): AT4G26620 (Arabidopsis thaliana, 82.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:527912-528862:+ | gene-YBR151W_AKU4011 | rna-NM_001178499.1_AKU4011 | cds-NP_009709.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:518478-519428:+ | gene-YBR151W_BG1 | rna-NM_001178499.1_BG1 | cds-NP_009709.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:530949-531899:+ | gene-YBR151W_Bruggeman | rna-NM_001178499.1_Bruggeman | cds-NP_009709.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:425052-426002:+ | gene-YBR151W_CAT1 | rna-NM_001178499.1_CAT1 | cds-NP_009709.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:519691-520641:+ | gene-YBR151W_CBS1585 | rna-NM_001178499.1_CBS1585 | cds-NP_009709.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:527786-528736:+ | gene-YBR151W_CBS436 | rna-NM_001178499.1_CBS436 | cds-NP_009709.1_CBS436 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:617557-618507:+ | gene-YBR151W_CBS6412 | rna-NM_001178499.1_CBS6412 | cds-NP_009709.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:525326-526276:+ | gene-YBR151W_CBS6413 | rna-NM_001178499.1_CBS6413 | cds-NP_009709.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:538796-539746:+ | gene-YBR151W_CENPK1137D | rna-NM_001178499.1_CENPK1137D | cds-NP_009709.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:653932-654882:+ | gene-YBR151W_EthanolRed | rna-NM_001178499.1_EthanolRed | cds-NP_009709.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:543944-544894:+ | gene-YBR151W_FaliES1 | rna-NM_001178499.1_FaliES1 | cds-NP_009709.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000322.1:15269-16219:- | gene-YBR151W_JAY291 | rna-NM_001178499.1_JAY291 | cds-NP_009709.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:532576-533526:+ | gene-YBR151W_MUCL30387 | rna-NM_001178499.1_MUCL30387 | cds-NP_009709.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:531869-532819:+ | gene-YBR151W_MUCL30388 | rna-NM_001178499.1_MUCL30388 | cds-NP_009709.1_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:518078-519028:+ | gene-YBR151W_MUCL39482 | rna-NM_001178499.1_MUCL39482 | cds-NP_009709.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:527970-528920:+ | gene-YBR151W_MUCL42920 | rna-NM_001178499.1_MUCL42920 | cds-NP_009709.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:544825-545775:+ | gene-YBR151W_NCIM3186 | rna-NM_001178499.1_NCIM3186 | cds-NP_009709.1_NCIM3186 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:520628-521578:+ | gene-YBR151W_NCYC1407 | rna-NM_001178499.1_NCYC1407 | cds-NP_009709.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:533262-534212:+ | gene-YBR151W_PE2H3 | rna-NM_001178499.1_PE2H3 | cds-NP_009709.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:530938-531888:+ | gene-YBR151W_PE2H4 | rna-NM_001178499.1_PE2H4 | cds-NP_009709.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:545028-545978:+ | gene-YBR151W_S288C | rna-NM_001178499.1_S288C | cds-NP_009709.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000032.1:66207-67157:+ | gene-YBR151W_SA1 | rna-NM_001178499.1_SA1 | cds-NP_009709.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:542957-543907:+ | gene-YBR151W_ThermosaccDry | rna-NM_001178499.1_ThermosaccDry | cds-NP_009709.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:524453-525403:+ | gene-YBR151W_VR1 | rna-NM_001178499.1_VR1 | cds-NP_009709.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:518103-519053:+ | gene-YBR151W_ZTW1 | rna-NM_001178499.1_ZTW1 | cds-NP_009709.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:555283-556233:+ | gene-YBR151W_Sparadoxus | rna-NM_001178499.1_Sparadoxus | cds-NP_009709.1_Sparadoxus | 89.2 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |