Gene name: APC9
Reference locus (S288C): YLR102C
Gene biotype: protein_coding
Description: Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C); APC/C is a ubiquitin-protein ligase required for degradation of anaphase inhibitors, including mitotic cyclins, during the metaphase/anaphase transition
Top 10 interactors (score): APC1 (0.999); MND2 (0.999); APC11 (0.999); CDC27 (0.999); APC5 (0.999); CDC23 (0.999); DOC1 (0.999); SWM1 (0.999); APC2 (0.999); CDC26 (0.999); CDC16 (0.999); APC4 (0.999); CDC20 (0.947); AMA1 (0.931); MET30 (0.91); ASI2 (0.904); SLX8 (0.9); CDC4 (0.9); ASI3 (0.9); ASI1 (0.9)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:325469-326266:- | gene-YLR102C_AKU4011 | rna-NM_001181989.1_AKU4011 | cds-NP_013203.1_AKU4011 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:288650-289447:- | gene-YLR102C_BG1 | rna-NM_001181989.1_BG1 | cds-NP_013203.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:335319-336116:- | gene-YLR102C_Bruggeman | rna-NM_001181989.1_Bruggeman | cds-NP_013203.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:335671-336468:- | gene-YLR102C_CAT1 | rna-NM_001181989.1_CAT1 | cds-NP_013203.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:332611-333408:- | gene-YLR102C_CBS1585 | rna-NM_001181989.1_CBS1585 | cds-NP_013203.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:323178-323975:- | gene-YLR102C_CBS436 | rna-NM_001181989.1_CBS436 | cds-NP_013203.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:331030-331827:- | gene-YLR102C_CBS6412 | rna-NM_001181989.1_CBS6412 | cds-NP_013203.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:332877-333674:- | gene-YLR102C_CBS6413 | rna-NM_001181989.1_CBS6413 | cds-NP_013203.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:327994-328791:- | gene-YLR102C_CENPK1137D | rna-NM_001181989.1_CENPK1137D | cds-NP_013203.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:325028-325825:- | gene-YLR102C_EthanolRed | rna-NM_001181989.1_EthanolRed | cds-NP_013203.1_EthanolRed | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:324847-325644:- | gene-YLR102C_FaliES1 | rna-NM_001181989.1_FaliES1 | cds-NP_013203.1_FaliES1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000129.1:99779-100576:- | gene-YLR102C_JAY291 | rna-NM_001181989.1_JAY291 | cds-NP_013203.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:332698-333495:- | gene-YLR102C_MUCL30387 | rna-NM_001181989.1_MUCL30387 | cds-NP_013203.1_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:340363-341160:- | gene-YLR102C_MUCL30388 | rna-NM_001181989.1_MUCL30388 | cds-NP_013203.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:333119-333916:- | gene-YLR102C_MUCL39482 | rna-NM_001181989.1_MUCL39482 | cds-NP_013203.1_MUCL39482 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:333023-333820:- | gene-YLR102C_MUCL42920 | rna-NM_001181989.1_MUCL42920 | cds-NP_013203.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:342944-343741:- | gene-YLR102C_NCIM3186 | rna-NM_001181989.1_NCIM3186 | cds-NP_013203.1_NCIM3186 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:325182-325979:- | gene-YLR102C_NCYC1407 | rna-NM_001181989.1_NCYC1407 | cds-NP_013203.1_NCYC1407 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:330944-331741:- | gene-YLR102C_PE2H3 | rna-NM_001181989.1_PE2H3 | cds-NP_013203.1_PE2H3 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:330685-331482:- | gene-YLR102C_PE2H4 | rna-NM_001181989.1_PE2H4 | cds-NP_013203.1_PE2H4 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:342970-343767:- | gene-YLR102C_S288C | rna-NM_001181989.1_S288C | cds-NP_013203.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000033.1:30330-31127:+ | gene-YLR102C_SA1 | rna-NM_001181989.1_SA1 | cds-NP_013203.1_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:325020-325817:- | gene-YLR102C_ThermosaccDry | rna-NM_001181989.1_ThermosaccDry | cds-NP_013203.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:339185-339982:- | gene-YLR102C_VR1 | rna-NM_001181989.1_VR1 | cds-NP_013203.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:324445-325242:- | gene-YLR102C_ZTW1 | rna-NM_001181989.1_ZTW1 | cds-NP_013203.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:333228-334025:- | gene-YLR102C_Sparadoxus | rna-NM_001181989.1_Sparadoxus | cds-NP_013203.1_Sparadoxus | 88.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |