Gene name: ANB1
Reference locus (S288C): YJR047C
Gene biotype: protein_coding
Description: Eukaryotic translation initiation factor 5A-2; Translation elongation factor eIF-5A; previously thought to function in translation initiation; undergoes an essential hypusination modification; expressed under anaerobic conditions; ANB1 has a paralog, HYP2, that arose from the whole genome duplication; human EIF5A complements the inviability of the yeast hyp2 anb1 double null mutant
Top 10 interactors (score): DYS1 (0.999); LIA1 (0.995); TEF4 (0.974); RPL5 (0.971); CAM1 (0.953); RPS2 (0.951); RPL10 (0.949); HEM13 (0.947); RPS13 (0.943); ASC1 (0.937); RPL28 (0.932); RPS20 (0.931); RPL39 (0.923); RPL15B (0.913); RPL15A (0.912); RPL38 (0.912); DAN1 (0.911); RPS3 (0.909); ROX1 (0.905); EFT1 (0.902)
Homologues (species, bitscore): EIF5A2 (Homo sapiens, 214.5); Eif5a2 (Mus musculus, 214.5); eif5a (Danio rerio, 215.3); eif5a (Xenopus tropicalis, 206.1); eIF-5A (Drosophila melanogaster, 204.1); iff-2 (Caenorhabditis elegans, 192.2); ELF5A-1 (Arabidopsis thaliana, 200.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:496598-497071:- | gene-YJR047C_AKU4011 | rna-NM_001181705.3_AKU4011 | cds-NP_012581.3_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:115868-116341:+ | gene-YJR047C_BG1 | rna-NM_001181705.3_BG1 | cds-NP_012581.3_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:510649-511122:- | gene-YJR047C_Bruggeman | rna-NM_001181705.3_Bruggeman | cds-NP_012581.3_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:514811-515284:- | gene-YJR047C_CAT1 | rna-NM_001181705.3_CAT1 | cds-NP_012581.3_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:508666-509139:- | gene-YJR047C_CBS1585 | rna-NM_001181705.3_CBS1585 | cds-NP_012581.3_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:527124-527597:- | gene-YJR047C_CBS436 | rna-NM_001181705.3_CBS436 | cds-NP_012581.3_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:496383-496856:- | gene-YJR047C_CBS6412 | rna-NM_001181705.3_CBS6412 | cds-NP_012581.3_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:498628-499101:- | gene-YJR047C_CBS6413 | rna-NM_001181705.3_CBS6413 | cds-NP_012581.3_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:507258-507731:- | gene-YJR047C_CENPK1137D | rna-NM_001181705.3_CENPK1137D | cds-NP_012581.3_CENPK1137D | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:501513-501986:- | gene-YJR047C_EthanolRed | rna-NM_001181705.3_EthanolRed | cds-NP_012581.3_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:512730-513203:- | gene-YJR047C_FaliES1 | rna-NM_001181705.3_FaliES1 | cds-NP_012581.3_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000250.1:27593-27873:- | gene-YJR047C_JAY291 | rna-NM_001181705.3_JAY291 | cds-NP_012581.3_JAY291 | 59.2 | 59.2 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:510939-511412:- | gene-YJR047C_MUCL30387 | rna-NM_001181705.3_MUCL30387 | cds-NP_012581.3_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:507491-507964:- | gene-YJR047C_MUCL30388 | rna-NM_001181705.3_MUCL30388 | cds-NP_012581.3_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:502125-502598:- | gene-YJR047C_MUCL39482 | rna-NM_001181705.3_MUCL39482 | cds-NP_012581.3_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:506898-507371:- | gene-YJR047C_MUCL42920 | rna-NM_001181705.3_MUCL42920 | cds-NP_012581.3_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:524887-525360:- | gene-YJR047C_NCIM3186 | rna-NM_001181705.3_NCIM3186 | cds-NP_012581.3_NCIM3186 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:499969-500442:- | gene-YJR047C_NCYC1407 | rna-NM_001181705.3_NCYC1407 | cds-NP_012581.3_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:517830-518303:- | gene-YJR047C_PE2H3 | rna-NM_001181705.3_PE2H3 | cds-NP_012581.3_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:511526-511999:- | gene-YJR047C_PE2H4 | rna-NM_001181705.3_PE2H4 | cds-NP_012581.3_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:524908-525381:- | gene-YJR047C_S288C | rna-NM_001181705.3_S288C | cds-NP_012581.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000003.1:309756-310229:- | gene-YJR047C_SA1 | rna-NM_001181705.3_SA1 | cds-NP_012581.3_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:506418-506891:- | gene-YJR047C_ThermosaccDry | rna-NM_001181705.3_ThermosaccDry | cds-NP_012581.3_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:508909-509382:- | gene-YJR047C_VR1 | rna-NM_001181705.3_VR1 | cds-NP_012581.3_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:486306-486779:- | gene-YJR047C_ZTW1 | rna-NM_001181705.3_ZTW1 | cds-NP_012581.3_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:512668-513141:- | gene-YJR047C_Sparadoxus | rna-NM_001181705.3_Sparadoxus | cds-NP_012581.3_Sparadoxus | 96.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |