Gene name: AMS1
Reference locus (S288C): YGL156W
Gene biotype: protein_coding
Description: Alpha-mannosidase; Vacuolar alpha mannosidase; involved in free oligosaccharide (fOS) degradation; delivered to the vacuole in a novel pathway separate from the secretory pathway
Top 10 interactors (score): ATG19 (0.996); APE1 (0.993); ATG34 (0.993); APE4 (0.979); ICP55 (0.965); PNG1 (0.954); GPG1 (0.908); ATG8 (0.906); NQM1 (0.906); MNL1 (0.901); ATG11 (0.891); MNS1 (0.885); MSC1 (0.87); PRB1 (0.859); UGX2 (0.824); PRC1 (0.795); YHR138C (0.791); SCH9 (0.79); PEP4 (0.774); GDB1 (0.766)
Homologues (species, bitscore): MAN2C1 (Homo sapiens, 593.2); Man2c1 (Mus musculus, 588.6); LOC569595 (Danio rerio, 629.8); man2c1 (Xenopus tropicalis, 582.8); LM408 (Drosophila melanogaster, 52.8)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:213013-216264:+ | gene-YGL156W_AKU4011 | rna-NM_001181021.1_AKU4011 | cds-NP_011359.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000132.1:188692-191943:- | gene-YGL156W_BG1 | rna-NM_001181021.1_BG1 | cds-NP_011359.1_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:215157-218408:+ | gene-YGL156W_Bruggeman | rna-NM_001181021.1_Bruggeman | cds-NP_011359.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:211023-214274:+ | gene-YGL156W_CAT1 | rna-NM_001181021.1_CAT1 | cds-NP_011359.1_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:216396-219647:+ | gene-YGL156W_CBS1585 | rna-NM_001181021.1_CBS1585 | cds-NP_011359.1_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:211005-214256:+ | gene-YGL156W_CBS436 | rna-NM_001181021.1_CBS436 | cds-NP_011359.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:202605-205856:+ | gene-YGL156W_CBS6412 | rna-NM_001181021.1_CBS6412 | cds-NP_011359.1_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:210949-214200:+ | gene-YGL156W_CBS6413 | rna-NM_001181021.1_CBS6413 | cds-NP_011359.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:210678-213929:+ | gene-YGL156W_CENPK1137D | rna-NM_001181021.1_CENPK1137D | cds-NP_011359.1_CENPK1137D | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:203157-206408:+ | gene-YGL156W_EthanolRed | rna-NM_001181021.1_EthanolRed | cds-NP_011359.1_EthanolRed | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:204403-207654:+ | gene-YGL156W_FaliES1 | rna-NM_001181021.1_FaliES1 | cds-NP_011359.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000090.1:54226-57477:+ | gene-YGL156W_JAY291 | rna-NM_001181021.1_JAY291 | cds-NP_011359.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:212382-215633:+ | gene-YGL156W_MUCL30387 | rna-NM_001181021.1_MUCL30387 | cds-NP_011359.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:215497-218748:+ | gene-YGL156W_MUCL30388 | rna-NM_001181021.1_MUCL30388 | cds-NP_011359.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:213176-216427:+ | gene-YGL156W_MUCL39482 | rna-NM_001181021.1_MUCL39482 | cds-NP_011359.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:215733-218984:+ | gene-YGL156W_MUCL42920 | rna-NM_001181021.1_MUCL42920 | cds-NP_011359.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:210416-213667:+ | gene-YGL156W_NCIM3186 | rna-NM_001181021.1_NCIM3186 | cds-NP_011359.1_NCIM3186 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:204640-207891:+ | gene-YGL156W_NCYC1407 | rna-NM_001181021.1_NCYC1407 | cds-NP_011359.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:206527-209778:+ | gene-YGL156W_PE2H3 | rna-NM_001181021.1_PE2H3 | cds-NP_011359.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:211522-214773:+ | gene-YGL156W_PE2H4 | rna-NM_001181021.1_PE2H4 | cds-NP_011359.1_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:210416-213667:+ | gene-YGL156W_S288C | rna-NM_001181021.1_S288C | cds-NP_011359.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000081.1:41080-44331:- | gene-YGL156W_SA1 | rna-NM_001181021.1_SA1 | cds-NP_011359.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:204632-207883:+ | gene-YGL156W_ThermosaccDry | rna-NM_001181021.1_ThermosaccDry | cds-NP_011359.1_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:211441-214692:+ | gene-YGL156W_VR1 | rna-NM_001181021.1_VR1 | cds-NP_011359.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:202737-205988:+ | gene-YGL156W_ZTW1 | rna-NM_001181021.1_ZTW1 | cds-NP_011359.1_ZTW1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:208799-212050:+ | gene-YGL156W_Sparadoxus | rna-NM_001181021.1_Sparadoxus | cds-NP_011359.1_Sparadoxus | 91.2 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |