AMN1 (YBR158W)


Gene profile

Gene name: AMN1
Reference locus (S288C): YBR158W
Gene biotype: protein_coding

Description: Antagonist of mitotic exit network protein 1; Protein required for daughter cell separation; multiple mitotic checkpoints, and chromosome stability; contains 12 degenerate leucine-rich repeat motifs; expression is induced by the Mitotic Exit Network (MEN); Belongs to the AMN1 family

Top 10 interactors (score): SCW11 (0.977); SUN4 (0.964); DSE1 (0.952); DSE2 (0.948); EGT2 (0.943); TEM1 (0.93); SKP1 (0.924); CTS1 (0.882); CDC53 (0.874); DSE4 (0.85); ACE2 (0.829); HRT3 (0.8); SSZ1 (0.792); PHR1 (0.76); ZUO1 (0.758); MKT1 (0.748); HIR3 (0.725); GPA1 (0.72); ICS2 (0.71); FLO1 (0.692)

Homologues (species, bitscore): AMN1 (Homo sapiens, 59.3); Fbxl2 (Mus musculus, 58.2); fbxl2 (Danio rerio, 59.3); fbxl20 (Xenopus tropicalis, 55.5); CG9003 (Drosophila melanogaster, 66.2); C02F5.7 (Caenorhabditis elegans, 53.9); AT5G23340 (Arabidopsis thaliana, 55.8)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005296.1:539431-541080:+ gene-YBR158W_AKU4011 rna-NM_001178506.1_AKU4011 cds-NP_009716.1_AKU4011 99.8 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000179.1:529996-531645:+ gene-YBR158W_BG1 rna-NM_001178506.1_BG1 cds-NP_009716.1_BG1 99.5 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:542469-544118:+ gene-YBR158W_Bruggeman rna-NM_001178506.1_Bruggeman cds-NP_009716.1_Bruggeman 99.5 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:436570-438219:+ gene-YBR158W_CAT1 rna-NM_001178506.1_CAT1 cds-NP_009716.1_CAT1 99.5 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005360.1:531208-532857:+ gene-YBR158W_CBS1585 rna-NM_001178506.1_CBS1585 cds-NP_009716.1_CBS1585 99.8 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005344.1:539305-540954:+ gene-YBR158W_CBS436 rna-NM_001178506.1_CBS436 cds-NP_009716.1_CBS436 99.5 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:629076-630725:+ gene-YBR158W_CBS6412 rna-NM_001178506.1_CBS6412 cds-NP_009716.1_CBS6412 99.8 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005312.1:536845-538494:+ gene-YBR158W_CBS6413 rna-NM_001178506.1_CBS6413 cds-NP_009716.1_CBS6413 99.8 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001523.1:550325-551974:+ gene-YBR158W_CENPK1137D rna-NM_001178506.1_CENPK1137D cds-NP_009716.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:665451-667100:+ gene-YBR158W_EthanolRed rna-NM_001178506.1_EthanolRed cds-NP_009716.1_EthanolRed 99.9 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005536.1:555463-557112:+ gene-YBR158W_FaliES1 rna-NM_001178506.1_FaliES1 cds-NP_009716.1_FaliES1 99.9 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000322.1:3051-4700:- gene-YBR158W_JAY291 rna-NM_001178506.1_JAY291 cds-NP_009716.1_JAY291 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005408.1:544096-545745:+ gene-YBR158W_MUCL30387 rna-NM_001178506.1_MUCL30387 cds-NP_009716.1_MUCL30387 99.4 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005440.1:543390-545039:+ gene-YBR158W_MUCL30388 rna-NM_001178506.1_MUCL30388 cds-NP_009716.1_MUCL30388 99.5 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005280.1:529595-531244:+ gene-YBR158W_MUCL39482 rna-NM_001178506.1_MUCL39482 cds-NP_009716.1_MUCL39482 99.8 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005424.1:539490-541139:+ gene-YBR158W_MUCL42920 rna-NM_001178506.1_MUCL42920 cds-NP_009716.1_MUCL42920 99.3 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011811.1:556346-557995:+ gene-YBR158W_NCIM3186 rna-NM_001178506.1_NCIM3186 cds-NP_009716.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005264.1:532147-533796:+ gene-YBR158W_NCYC1407 rna-NM_001178506.1_NCYC1407 cds-NP_009716.1_NCYC1407 99.8 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:544781-546430:+ gene-YBR158W_PE2H3 rna-NM_001178506.1_PE2H3 cds-NP_009716.1_PE2H3 99.5 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999873.1:542457-544106:+ gene-YBR158W_PE2H4 rna-NM_001178506.1_PE2H4 cds-NP_009716.1_PE2H4 99.5 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001134.8:556549-558198:+ gene-YBR158W_S288C rna-NM_001178506.1_S288C cds-NP_009716.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000032.1:77725-79374:+ gene-YBR158W_SA1 rna-NM_001178506.1_SA1 cds-NP_009716.1_SA1 99.5 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005488.1:554476-556125:+ gene-YBR158W_ThermosaccDry rna-NM_001178506.1_ThermosaccDry cds-NP_009716.1_ThermosaccDry 99.9 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005456.1:535971-537620:+ gene-YBR158W_VR1 rna-NM_001178506.1_VR1 cds-NP_009716.1_VR1 99.5 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000003.1:529622-531271:+ gene-YBR158W_ZTW1 rna-NM_001178506.1_ZTW1 cds-NP_009716.1_ZTW1 99.9 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:566820-568473:+ gene-YBR158W_Sparadoxus rna-NM_001178506.1_Sparadoxus cds-NP_009716.1_Sparadoxus 89.0 99.9 Unannotated 1 1 0 False False False True False

Additional files