Gene name: ALP1
Reference locus (S288C): YNL270C
Gene biotype: protein_coding
Description: Basic amino-acid permease; Arginine transporter; expression is normally very low and it is unclear what conditions would induce significant expression; ALP1 has a paralog, CAN1, that arose from the whole genome duplication
Top 10 interactors (score): RHB1 (0.907); HSP30 (0.902); YHC3 (0.867); BTN2 (0.787); MUP1 (0.751); FUR4 (0.712); PMA1 (0.7); AVT5 (0.649); YPQ1 (0.617); RTC2 (0.611); RSP5 (0.602); ARG1 (0.593); VBA2 (0.585); ARG8 (0.573); ASI2 (0.572); NPR1 (0.558); MEP1 (0.535); YNL194C (0.532); AVT2 (0.529); ARG3 (0.51)
Homologues (species, bitscore): LOC566270 (Danio rerio, 50.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:129770-131494:- | gene-YNL270C_AKU4011 | rna-NM_001183108.1_AKU4011 | cds-NP_014129.1_AKU4011 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:33631-35454:- | gene-YNL270C_BG1 | rna-NM_001183108.1_BG1 | cds-NP_014129.1_BG1 | 94.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:139536-141257:- | gene-YNL270C_Bruggeman | rna-NM_001183108.1_Bruggeman | cds-NP_014129.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:143247-144968:- | gene-YNL270C_CAT1 | rna-NM_001183108.1_CAT1 | cds-NP_014129.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:130172-131896:- | gene-YNL270C_CBS1585 | rna-NM_001183108.1_CBS1585 | cds-NP_014129.1_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:125213-126934:- | gene-YNL270C_CBS436 | rna-NM_001183108.1_CBS436 | cds-NP_014129.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:126582-128306:- | gene-YNL270C_CBS6412 | rna-NM_001183108.1_CBS6412 | cds-NP_014129.1_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:126863-128587:- | gene-YNL270C_CBS6413 | rna-NM_001183108.1_CBS6413 | cds-NP_014129.1_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:129812-131536:- | gene-YNL270C_CENPK1137D | rna-NM_001183108.1_CENPK1137D | cds-NP_014129.1_CENPK1137D | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:127413-129137:- | gene-YNL270C_EthanolRed | rna-NM_001183108.1_EthanolRed | cds-NP_014129.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:122150-123874:- | gene-YNL270C_FaliES1 | rna-NM_001183108.1_FaliES1 | cds-NP_014129.1_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000082.1:33332-35053:- | gene-YNL270C_JAY291 | rna-NM_001183108.1_JAY291 | cds-NP_014129.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:135076-136797:- | gene-YNL270C_MUCL30387 | rna-NM_001183108.1_MUCL30387 | cds-NP_014129.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:133140-134861:- | gene-YNL270C_MUCL30388 | rna-NM_001183108.1_MUCL30388 | cds-NP_014129.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:127662-129386:- | gene-YNL270C_MUCL39482 | rna-NM_001183108.1_MUCL39482 | cds-NP_014129.1_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:129874-131595:- | gene-YNL270C_MUCL42920 | rna-NM_001183108.1_MUCL42920 | cds-NP_014129.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:135909-137630:- | gene-YNL270C_NCIM3186 | rna-NM_001183108.1_NCIM3186 | cds-NP_014129.1_NCIM3186 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:129760-131484:- | gene-YNL270C_NCYC1407 | rna-NM_001183108.1_NCYC1407 | cds-NP_014129.1_NCYC1407 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:126668-128389:- | gene-YNL270C_PE2H3 | rna-NM_001183108.1_PE2H3 | cds-NP_014129.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:126056-127777:- | gene-YNL270C_PE2H4 | rna-NM_001183108.1_PE2H4 | cds-NP_014129.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:135940-137661:- | gene-YNL270C_S288C | rna-NM_001183108.1_S288C | cds-NP_014129.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000034.1:33401-35122:- | gene-YNL270C_SA1 | rna-NM_001183108.1_SA1 | cds-NP_014129.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:123007-124731:- | gene-YNL270C_ThermosaccDry | rna-NM_001183108.1_ThermosaccDry | cds-NP_014129.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:141866-143587:- | gene-YNL270C_VR1 | rna-NM_001183108.1_VR1 | cds-NP_014129.1_VR1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:33348-35072:- | gene-YNL270C_ZTW1 | rna-NM_001183108.1_ZTW1 | cds-NP_014129.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:133167-134888:- | gene-YNL270C_Sparadoxus | rna-NM_001183108.1_Sparadoxus | cds-NP_014129.1_Sparadoxus | 88.1 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |