Gene name: ALG13
Reference locus (S288C): YGL047W
Gene biotype: protein_coding
Description: UDP-N-acetylglucosamine transferase subunit ALG13; Catalytic component of UDP-GlcNAc transferase; required for the second step of dolichyl-linked oligosaccharide synthesis; anchored to the ER membrane via interaction with Alg14p; similar to bacterial and human glycosyltransferases; protein abundance increases in response to DNA replication stress; both human homologs ALG13 and ALG14 are required to complement yeast alg13 mutant
Top 10 interactors (score): ALG7 (0.999); ALG14 (0.999); ALG1 (0.998); ALG11 (0.981); DIE2 (0.96); ALG6 (0.935); ALG12 (0.915); ALG8 (0.907); ALG9 (0.907); ALG5 (0.892); RFT1 (0.862); ALG3 (0.838); DPM1 (0.779); STT3 (0.77); OST2 (0.747); GNT1 (0.709); MIP1 (0.696); GPI12 (0.671); ADO1 (0.667); AMS1 (0.647)
Homologues (species, bitscore): ALG13 (Homo sapiens, 70.5); Alg13 (Mus musculus, 67.8); zgc:92907 (Danio rerio, 83.6); alg13 (Xenopus tropicalis, 72.0); CG14512 (Drosophila melanogaster, 66.2); hpo-17 (Caenorhabditis elegans, 60.5); AT4G16710 (Arabidopsis thaliana, 83.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005301.1:413627-414235:+ | gene-YGL047W_AKU4011 | rna-NM_001180912.1_AKU4011 | cds-NP_011468.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000060.1:161894-162502:- | gene-YGL047W_BG1 | rna-NM_001180912.1_BG1 | cds-NP_011468.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005509.1:414196-414804:+ | gene-YGL047W_Bruggeman | rna-NM_001180912.1_Bruggeman | cds-NP_011468.1_Bruggeman | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005525.1:412609-413217:+ | gene-YGL047W_CAT1 | rna-NM_001180912.1_CAT1 | cds-NP_011468.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005365.1:415090-415698:+ | gene-YGL047W_CBS1585 | rna-NM_001180912.1_CBS1585 | cds-NP_011468.1_CBS1585 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005349.1:409216-409824:+ | gene-YGL047W_CBS436 | rna-NM_001180912.1_CBS436 | cds-NP_011468.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005333.1:407270-407878:+ | gene-YGL047W_CBS6412 | rna-NM_001180912.1_CBS6412 | cds-NP_011468.1_CBS6412 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005317.1:411307-411915:+ | gene-YGL047W_CBS6413 | rna-NM_001180912.1_CBS6413 | cds-NP_011468.1_CBS6413 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001528.1:411394-412002:+ | gene-YGL047W_CENPK1137D | rna-NM_001180912.1_CENPK1137D | cds-NP_011468.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005477.1:402003-402611:+ | gene-YGL047W_EthanolRed | rna-NM_001180912.1_EthanolRed | cds-NP_011468.1_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005541.1:405266-405874:+ | gene-YGL047W_FaliES1 | rna-NM_001180912.1_FaliES1 | cds-NP_011468.1_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000165.1:10957-11565:- | gene-YGL047W_JAY291 | rna-NM_001180912.1_JAY291 | cds-NP_011468.1_JAY291 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005413.1:411400-412008:+ | gene-YGL047W_MUCL30387 | rna-NM_001180912.1_MUCL30387 | cds-NP_011468.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005445.1:414442-415050:+ | gene-YGL047W_MUCL30388 | rna-NM_001180912.1_MUCL30388 | cds-NP_011468.1_MUCL30388 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005285.1:410883-411491:+ | gene-YGL047W_MUCL39482 | rna-NM_001180912.1_MUCL39482 | cds-NP_011468.1_MUCL39482 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005429.1:419301-419909:+ | gene-YGL047W_MUCL42920 | rna-NM_001180912.1_MUCL42920 | cds-NP_011468.1_MUCL42920 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011816.1:411552-412160:+ | gene-YGL047W_NCIM3186 | rna-NM_001180912.1_NCIM3186 | cds-NP_011468.1_NCIM3186 | 98.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005269.1:405008-405616:+ | gene-YGL047W_NCYC1407 | rna-NM_001180912.1_NCYC1407 | cds-NP_011468.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994146.1:407581-408189:+ | gene-YGL047W_PE2H3 | rna-NM_001180912.1_PE2H3 | cds-NP_011468.1_PE2H3 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999878.1:412631-413239:+ | gene-YGL047W_PE2H4 | rna-NM_001180912.1_PE2H4 | cds-NP_011468.1_PE2H4 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001139.9:411552-412160:+ | gene-YGL047W_S288C | rna-NM_001180912.1_S288C | cds-NP_011468.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000021.1:143468-144076:- | gene-YGL047W_SA1 | rna-NM_001180912.1_SA1 | cds-NP_011468.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005493.1:424630-425238:+ | gene-YGL047W_ThermosaccDry | rna-NM_001180912.1_ThermosaccDry | cds-NP_011468.1_ThermosaccDry | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005461.1:514576-515184:+ | gene-YGL047W_VR1 | rna-NM_001180912.1_VR1 | cds-NP_011468.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000014.1:402870-403478:+ | gene-YGL047W_ZTW1 | rna-NM_001180912.1_ZTW1 | cds-NP_011468.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047493.1:412289-412897:+ | gene-YGL047W_Sparadoxus | rna-NM_001180912.1_Sparadoxus | cds-NP_011468.1_Sparadoxus | 88.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |