Gene name: ALG12
Reference locus (S288C): YNR030W
Gene biotype: protein_coding
Description: Alpha-1,6-mannosyltransferase localized to the ER; responsible for addition of alpha-1,6 mannose to dolichol-linked Man7GlcNAc2; acts in the dolichol pathway for N-glycosylation; human homolog ALG12 complements yeast null mutant
Top 10 interactors (score): ALG9 (0.999); ALG3 (0.999); ALG5 (0.997); ALG6 (0.996); ALG8 (0.996); DIE2 (0.994); STT3 (0.982); ALG11 (0.981); OST5 (0.973); OST3 (0.945); ALG1 (0.944); WBP1 (0.938); OST6 (0.92); ALG13 (0.915); ALG14 (0.906); ALG7 (0.899); GPI10 (0.886); DPM1 (0.877); YOS9 (0.876); GAA1 (0.861)
Homologues (species, bitscore): ALG12 (Homo sapiens, 221.9); Alg12 (Mus musculus, 206.8); alg12 (Danio rerio, 222.2); alg12 (Xenopus tropicalis, 209.9); CG8412 (Drosophila melanogaster, 199.1); ZC513.5 (Caenorhabditis elegans, 190.7); ALG12 (Arabidopsis thaliana, 192.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005308.1:662444-664099:+ | gene-YNR030W_AKU4011 | rna-NM_001183207.1_AKU4011 | cds-NP_014427.1_AKU4011 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000155.1:570309-571964:+ | gene-YNR030W_BG1 | rna-NM_001183207.1_BG1 | cds-NP_014427.1_BG1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005516.1:679897-681552:+ | gene-YNR030W_Bruggeman | rna-NM_001183207.1_Bruggeman | cds-NP_014427.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005532.1:714154-715809:+ | gene-YNR030W_CAT1 | rna-NM_001183207.1_CAT1 | cds-NP_014427.1_CAT1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005372.1:668199-669854:+ | gene-YNR030W_CBS1585 | rna-NM_001183207.1_CBS1585 | cds-NP_014427.1_CBS1585 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005356.1:729868-731523:+ | gene-YNR030W_CBS436 | rna-NM_001183207.1_CBS436 | cds-NP_014427.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005340.1:657387-659042:+ | gene-YNR030W_CBS6412 | rna-NM_001183207.1_CBS6412 | cds-NP_014427.1_CBS6412 | 98.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005324.1:659092-660747:+ | gene-YNR030W_CBS6413 | rna-NM_001183207.1_CBS6413 | cds-NP_014427.1_CBS6413 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001535.1:672546-674201:+ | gene-YNR030W_CENPK1137D | rna-NM_001183207.1_CENPK1137D | cds-NP_014427.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005484.1:664136-665791:+ | gene-YNR030W_EthanolRed | rna-NM_001183207.1_EthanolRed | cds-NP_014427.1_EthanolRed | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005548.1:655339-656994:+ | gene-YNR030W_FaliES1 | rna-NM_001183207.1_FaliES1 | cds-NP_014427.1_FaliES1 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000037.1:45786-47441:- | gene-YNR030W_JAY291 | rna-NM_001183207.1_JAY291 | cds-NP_014427.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005420.1:677654-679309:+ | gene-YNR030W_MUCL30387 | rna-NM_001183207.1_MUCL30387 | cds-NP_014427.1_MUCL30387 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005452.1:718477-720132:+ | gene-YNR030W_MUCL30388 | rna-NM_001183207.1_MUCL30388 | cds-NP_014427.1_MUCL30388 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005292.1:659699-661354:+ | gene-YNR030W_MUCL39482 | rna-NM_001183207.1_MUCL39482 | cds-NP_014427.1_MUCL39482 | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005436.1:663872-665527:+ | gene-YNR030W_MUCL42920 | rna-NM_001183207.1_MUCL42920 | cds-NP_014427.1_MUCL42920 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011823.1:678768-680423:+ | gene-YNR030W_NCIM3186 | rna-NM_001183207.1_NCIM3186 | cds-NP_014427.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005276.1:662207-663862:+ | gene-YNR030W_NCYC1407 | rna-NM_001183207.1_NCYC1407 | cds-NP_014427.1_NCYC1407 | 98.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994153.1:663299-664954:+ | gene-YNR030W_PE2H3 | rna-NM_001183207.1_PE2H3 | cds-NP_014427.1_PE2H3 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999885.1:664617-666272:+ | gene-YNR030W_PE2H4 | rna-NM_001183207.1_PE2H4 | cds-NP_014427.1_PE2H4 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001146.8:678799-680454:+ | gene-YNR030W_S288C | rna-NM_001183207.1_S288C | cds-NP_014427.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000074.1:45936-47591:- | gene-YNR030W_SA1 | rna-NM_001183207.1_SA1 | cds-NP_014427.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005500.1:655676-657331:+ | gene-YNR030W_ThermosaccDry | rna-NM_001183207.1_ThermosaccDry | cds-NP_014427.1_ThermosaccDry | 98.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005468.1:697674-699329:+ | gene-YNR030W_VR1 | rna-NM_001183207.1_VR1 | cds-NP_014427.1_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000030.1:565085-566740:+ | gene-YNR030W_ZTW1 | rna-NM_001183207.1_ZTW1 | cds-NP_014427.1_ZTW1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047500.1:669767-671422:+ | gene-YNR030W_Sparadoxus | rna-NM_001183207.1_Sparadoxus | cds-NP_014427.1_Sparadoxus | 88.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |