Gene name: ALG1
Reference locus (S288C): YBR110W
Gene biotype: protein_coding
Description: Chitobiosyldiphosphodolichol beta-mannosyltransferase; Mannosyltransferase; involved in asparagine-linked glycosylation in the endoplasmic reticulum (ER); essential for viability; human homolog ALG1 complements yeast null mutant
Top 10 interactors (score): ALG13 (0.998); ALG2 (0.997); ALG11 (0.996); ALG14 (0.993); PSA1 (0.991); DPM1 (0.988); ALG7 (0.984); ALG3 (0.966); ALG6 (0.96); ALG5 (0.956); ALG9 (0.949); ALG8 (0.946); ALG12 (0.944); DIE2 (0.9); DSF1 (0.882); MAN2 (0.882); SEC59 (0.853); STT3 (0.826); SEC53 (0.824); YPK9 (0.768)
Homologues (species, bitscore): ALG1 (Homo sapiens, 259.6); Alg1 (Mus musculus, 255.4); alg1 (Danio rerio, 261.9); alg1 (Xenopus tropicalis, 264.2); CG18012 (Drosophila melanogaster, 260.4); T26A5.4 (Caenorhabditis elegans, 216.9); AT1G16570 (Arabidopsis thaliana, 212.6)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005296.1:441253-442602:+ | gene-YBR110W_AKU4011 | rna-NM_001178458.3_AKU4011 | cds-NP_009668.3_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000179.1:432296-433645:+ | gene-YBR110W_BG1 | rna-NM_001178458.3_BG1 | cds-NP_009668.3_BG1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005504.1:442981-444330:+ | gene-YBR110W_Bruggeman | rna-NM_001178458.3_Bruggeman | cds-NP_009668.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005520.1:445773-447122:+ | gene-YBR110W_CAT1 | rna-NM_001178458.3_CAT1 | cds-NP_009668.3_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005360.1:433536-434885:+ | gene-YBR110W_CBS1585 | rna-NM_001178458.3_CBS1585 | cds-NP_009668.3_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005344.1:441629-442978:+ | gene-YBR110W_CBS436 | rna-NM_001178458.3_CBS436 | cds-NP_009668.3_CBS436 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005328.1:531765-533114:+ | gene-YBR110W_CBS6412 | rna-NM_001178458.3_CBS6412 | cds-NP_009668.3_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005312.1:438677-440026:+ | gene-YBR110W_CBS6413 | rna-NM_001178458.3_CBS6413 | cds-NP_009668.3_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001523.1:450770-452119:+ | gene-YBR110W_CENPK1137D | rna-NM_001178458.3_CENPK1137D | cds-NP_009668.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005472.1:568024-569373:+ | gene-YBR110W_EthanolRed | rna-NM_001178458.3_EthanolRed | cds-NP_009668.3_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005536.1:457307-458656:+ | gene-YBR110W_FaliES1 | rna-NM_001178458.3_FaliES1 | cds-NP_009668.3_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000312.1:28225-29574:+ | gene-YBR110W_JAY291 | rna-NM_001178458.3_JAY291 | cds-NP_009668.3_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005408.1:445691-447040:+ | gene-YBR110W_MUCL30387 | rna-NM_001178458.3_MUCL30387 | cds-NP_009668.3_MUCL30387 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005440.1:444035-445384:+ | gene-YBR110W_MUCL30388 | rna-NM_001178458.3_MUCL30388 | cds-NP_009668.3_MUCL30388 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005280.1:431679-433028:+ | gene-YBR110W_MUCL39482 | rna-NM_001178458.3_MUCL39482 | cds-NP_009668.3_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005424.1:441333-442682:+ | gene-YBR110W_MUCL42920 | rna-NM_001178458.3_MUCL42920 | cds-NP_009668.3_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011811.1:458669-460018:+ | gene-YBR110W_NCIM3186 | rna-NM_001178458.3_NCIM3186 | cds-NP_009668.3_NCIM3186 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005264.1:434460-435809:+ | gene-YBR110W_NCYC1407 | rna-NM_001178458.3_NCYC1407 | cds-NP_009668.3_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994141.1:447070-448419:+ | gene-YBR110W_PE2H3 | rna-NM_001178458.3_PE2H3 | cds-NP_009668.3_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999873.1:444746-446095:+ | gene-YBR110W_PE2H4 | rna-NM_001178458.3_PE2H4 | cds-NP_009668.3_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001134.8:458872-460221:+ | gene-YBR110W_S288C | rna-NM_001178458.3_S288C | cds-NP_009668.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000017.1:17502-18851:- | gene-YBR110W_SA1 | rna-NM_001178458.3_SA1 | cds-NP_009668.3_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005488.1:456314-457663:+ | gene-YBR110W_ThermosaccDry | rna-NM_001178458.3_ThermosaccDry | cds-NP_009668.3_ThermosaccDry | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005456.1:438330-439679:+ | gene-YBR110W_VR1 | rna-NM_001178458.3_VR1 | cds-NP_009668.3_VR1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000003.1:431972-433321:+ | gene-YBR110W_ZTW1 | rna-NM_001178458.3_ZTW1 | cds-NP_009668.3_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047488.1:468939-470288:+ | gene-YBR110W_Sparadoxus | rna-NM_001178458.3_Sparadoxus | cds-NP_009668.3_Sparadoxus | 89.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |