ALD4 (YOR374W)


Gene profile

Gene name: ALD4
Reference locus (S288C): YOR374W
Gene biotype: protein_coding

Description: Mitochondrial aldehyde dehydrogenase; required for growth on ethanol and conversion of acetaldehyde to acetate; phosphorylated; activity is K+ dependent; utilizes NADP+ or NAD+ equally as coenzymes; expression is glucose repressed; can substitute for cytosolic NADP-dependent aldehyde dehydrogenase when directed to the cytosol; human homolog ALDH2 can complement yeast ald4 mutant

Top 10 interactors (score): GAD1 (0.986); GUT2 (0.984); UGA1 (0.975); ACH1 (0.971); POX1 (0.968); POS5 (0.967); GLK1 (0.964); ACS1 (0.96); ACS2 (0.955); YEF1 (0.954); NDI1 (0.95); HXK1 (0.947); ADH2 (0.94); NDE1 (0.929); PGM2 (0.928); NDE2 (0.927); UTR1 (0.923); AMD2 (0.919); FMS1 (0.914); TDA10 (0.913)

Homologues (species, bitscore): ALDH1B1 (Homo sapiens, 504.6); Aldh2 (Mus musculus, 505.4); aldh2l (Danio rerio, 501.9); aldh2 (Xenopus tropicalis, 511.5); Aldh (Drosophila melanogaster, 476.1); alh-1 (Caenorhabditis elegans, 501.1); ALDH2B7 (Arabidopsis thaliana, 476.9)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:1026433-1027992:+ gene-YOR374W_AKU4011 rna-NM_001183794.1_AKU4011 cds-NP_015019.1_AKU4011 99.5 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000183.1:33523-35082:- gene-YOR374W_BG1 rna-NM_001183794.1_BG1 cds-NP_015019.1_BG1 99.7 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:1011232-1012791:+ gene-YOR374W_Bruggeman rna-NM_001183794.1_Bruggeman cds-NP_015019.1_Bruggeman 99.8 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:1011900-1013459:+ gene-YOR374W_CAT1 rna-NM_001183794.1_CAT1 cds-NP_015019.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:1010843-1012402:+ gene-YOR374W_CBS1585 rna-NM_001183794.1_CBS1585 cds-NP_015019.1_CBS1585 99.5 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005357.1:1005655-1007214:+ gene-YOR374W_CBS436 rna-NM_001183794.1_CBS436 cds-NP_015019.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:239780-241339:+ gene-YOR374W_CBS6412 rna-NM_001183794.1_CBS6412 cds-NP_015019.1_CBS6412 99.7 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:1015117-1016676:+ gene-YOR374W_CBS6413 rna-NM_001183794.1_CBS6413 cds-NP_015019.1_CBS6413 99.7 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:1039696-1041255:+ gene-YOR374W_CENPK1137D rna-NM_001183794.1_CENPK1137D cds-NP_015019.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:254963-256522:+ gene-YOR374W_EthanolRed rna-NM_001183794.1_EthanolRed cds-NP_015019.1_EthanolRed 99.7 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:1007971-1009530:+ gene-YOR374W_FaliES1 rna-NM_001183794.1_FaliES1 cds-NP_015019.1_FaliES1 99.7 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000314.1:2323-3883:+ gene-YOR374W_JAY291 rna-NM_001183794.1_JAY291 cds-NP_015019.1_JAY291 99.8 100.0 Unannotated 1 1 0 False False False True False
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:1020566-1022125:+ gene-YOR374W_MUCL30387 rna-NM_001183794.1_MUCL30387 cds-NP_015019.1_MUCL30387 99.8 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:1028593-1030152:+ gene-YOR374W_MUCL30388 rna-NM_001183794.1_MUCL30388 cds-NP_015019.1_MUCL30388 99.8 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:1017363-1018922:+ gene-YOR374W_MUCL39482 rna-NM_001183794.1_MUCL39482 cds-NP_015019.1_MUCL39482 99.5 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:1024984-1026543:+ gene-YOR374W_MUCL42920 rna-NM_001183794.1_MUCL42920 cds-NP_015019.1_MUCL42920 99.8 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:1039729-1041288:+ gene-YOR374W_NCIM3186 rna-NM_001183794.1_NCIM3186 cds-NP_015019.1_NCIM3186 99.6 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:1018383-1019942:+ gene-YOR374W_NCYC1407 rna-NM_001183794.1_NCYC1407 cds-NP_015019.1_NCYC1407 99.7 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:1013678-1015237:+ gene-YOR374W_PE2H3 rna-NM_001183794.1_PE2H3 cds-NP_015019.1_PE2H3 99.9 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:1030029-1031588:+ gene-YOR374W_PE2H4 rna-NM_001183794.1_PE2H4 cds-NP_015019.1_PE2H4 99.9 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:1039840-1041399:+ gene-YOR374W_S288C rna-NM_001183794.1_S288C cds-NP_015019.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000016.1:144442-146001:+ gene-YOR374W_SA1 rna-NM_001183794.1_SA1 cds-NP_015019.1_SA1 99.6 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:1007153-1008712:+ gene-YOR374W_ThermosaccDry rna-NM_001183794.1_ThermosaccDry cds-NP_015019.1_ThermosaccDry 99.7 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:1068659-1070218:+ gene-YOR374W_VR1 rna-NM_001183794.1_VR1 cds-NP_015019.1_VR1 99.9 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000032.1:739879-741438:+ gene-YOR374W_ZTW1 rna-NM_001183794.1_ZTW1 cds-NP_015019.1_ZTW1 99.6 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:1013870-1015429:+ gene-YOR374W_Sparadoxus rna-NM_001183794.1_Sparadoxus cds-NP_015019.1_Sparadoxus 92.5 100.0 Verified 1 1 1 False True False False False

Additional files