ALD2 (YMR170C)


Gene profile

Gene name: ALD2
Reference locus (S288C): YMR170C
Gene biotype: protein_coding

Description: Cytoplasmic aldehyde dehydrogenase; involved in ethanol oxidation and beta-alanine biosynthesis; uses NAD+ as the preferred coenzyme; expression is stress induced and glucose repressed; very similar to Ald3p

Top 10 interactors (score): FMS1 (0.973); ACH1 (0.967); AMD2 (0.963); UGA1 (0.961); GAD1 (0.951); PAN6 (0.947); ACS2 (0.946); ACS1 (0.942); POS5 (0.914); TDA10 (0.91); YEF1 (0.905); NIT1 (0.905); UTR1 (0.901); PDC6 (0.901); PDC1 (0.895); ADH2 (0.888); GDH2 (0.878); POX1 (0.877); ADH1 (0.875); SFA1 (0.865)

Homologues (species, bitscore): ALDH1A1 (Homo sapiens, 455.3); Aldh1a2 (Mus musculus, 449.5); aldh2l (Danio rerio, 452.6); aldh1b1 (Xenopus tropicalis, 445.3); Aldh (Drosophila melanogaster, 435.3); alh-1 (Caenorhabditis elegans, 451.8); ALDH2C4 (Arabidopsis thaliana, 431.0)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:641311-642831:- gene-YMR170C_AKU4011 rna-NM_001182674.1_AKU4011 cds-NP_013893.1_AKU4011 98.7 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000068.1:29998-31518:+ gene-YMR170C_BG1 rna-NM_001182674.1_BG1 cds-NP_013893.1_BG1 99.9 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:584239-585759:- gene-YMR170C_Bruggeman rna-NM_001182674.1_Bruggeman cds-NP_013893.1_Bruggeman 99.6 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:587240-588874:- gene-YMR170C_CAT1 rna-NM_001182674.1_CAT1 cds-NP_013893.1_CAT1 92.4 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:573992-575512:- gene-YMR170C_CBS1585 rna-NM_001182674.1_CBS1585 cds-NP_013893.1_CBS1585 98.8 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:577857-579377:- gene-YMR170C_CBS436 rna-NM_001182674.1_CBS436 cds-NP_013893.1_CBS436 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:686609-687717:- gene-YMR170C_CBS6412 rna-NM_001182674.1_CBS6412 cds-NP_013893.1_CBS6412 72.0 72.9 Unannotated 1 1 0 False False False True False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:572542-574062:- gene-YMR170C_CBS6413 rna-NM_001182674.1_CBS6413 cds-NP_013893.1_CBS6413 98.8 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:596087-597617:- gene-YMR170C_CENPK1137D rna-NM_001182674.1_CENPK1137D cds-NP_013893.1_CENPK1137D 77.3 99.3 Unannotated 1 1 0 False False True False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005486.1:634168-635688:- gene-YMR170C_EthanolRed rna-NM_001182674.1_EthanolRed cds-NP_013893.1_EthanolRed 98.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:579322-580842:- gene-YMR170C_FaliES1 rna-NM_001182674.1_FaliES1 cds-NP_013893.1_FaliES1 98.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000279.1:1-415:+ gene-YMR170C_JAY291 rna-NM_001182674.1_JAY291 cds-NP_013893.1_JAY291 27.1 27.2 Verified 1 1 0 False False True False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:579213-580733:- gene-YMR170C_MUCL30387 rna-NM_001182674.1_MUCL30387 cds-NP_013893.1_MUCL30387 99.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:574678-576198:- gene-YMR170C_MUCL39482 rna-NM_001182674.1_MUCL39482 cds-NP_013893.1_MUCL39482 98.8 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:581506-583009:- gene-YMR170C_MUCL42920 rna-NM_001182674.1_MUCL42920 cds-NP_013893.1_MUCL42920 96.4 98.4 Unannotated 1 1 0 False False False True False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:601516-603036:- gene-YMR170C_NCIM3186 rna-NM_001182674.1_NCIM3186 cds-NP_013893.1_NCIM3186 98.6 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:574380-575900:- gene-YMR170C_NCYC1407 rna-NM_001182674.1_NCYC1407 cds-NP_013893.1_NCYC1407 98.8 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:584722-586242:- gene-YMR170C_PE2H3 rna-NM_001182674.1_PE2H3 cds-NP_013893.1_PE2H3 99.9 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:585184-586704:- gene-YMR170C_PE2H4 rna-NM_001182674.1_PE2H4 cds-NP_013893.1_PE2H4 99.7 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:601562-603082:- gene-YMR170C_S288C rna-NM_001182674.1_S288C cds-NP_013893.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:575054-576574:- gene-YMR170C_ThermosaccDry rna-NM_001182674.1_ThermosaccDry cds-NP_013893.1_ThermosaccDry 98.6 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:587962-589725:- gene-YMR170C_VR1 rna-NM_001182674.1_VR1 cds-NP_013893.1_VR1 79.1 96.1 Unannotated 1 1 0 False False True False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000027.1:549677-551197:- gene-YMR170C_ZTW1 rna-NM_001182674.1_ZTW1 cds-NP_013893.1_ZTW1 99.7 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:593338-594858:- gene-YMR170C_Sparadoxus rna-NM_001182674.1_Sparadoxus cds-NP_013893.1_Sparadoxus 89.4 100.0 Verified 1 1 1 False True False False False

Additional files