Gene name: AIM45
Reference locus (S288C): YPR004C
Gene biotype: protein_coding
Description: Probable electron transfer flavoprotein subunit alpha, mitochondrial; Putative ortholog of mammalian ETF-alpha; interacts with frataxin, Yfh1p; null mutant displays elevated frequency of mitochondrial genome loss; may have a role in oxidative stress response; ETF-alpha is an electron transfer flavoprotein complex subunit
Top 10 interactors (score): CIR2 (0.999); CIR1 (0.999); POX1 (0.987); HSP10 (0.981); MXR1 (0.967); ATX1 (0.962); COX17 (0.962); MDH1 (0.893); ATP1 (0.863); MDH3 (0.857); SDH2 (0.826); MDH2 (0.814); DLD1 (0.806); YFH1 (0.754); LPD1 (0.754); NDE2 (0.747); NDI1 (0.744); MTO1 (0.722); QCR2 (0.71); FAD1 (0.708)
Homologues (species, bitscore): ETFA (Homo sapiens, 290.0); Etfa (Mus musculus, 281.2); etfa (Danio rerio, 285.0); etfa (Xenopus tropicalis, 280.0); wal (Drosophila melanogaster, 260.0); F27D4.1 (Caenorhabditis elegans, 263.8); ETFALPHA (Arabidopsis thaliana, 250.0)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005310.1:535629-536662:- | gene-YPR004C_AKU4011 | rna-NM_001184101.1_AKU4011 | cds-NP_015329.1_AKU4011 | 99.3 | 99.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000091.1:360522-361556:+ | gene-YPR004C_BG1 | rna-NM_001184101.1_BG1 | cds-NP_015329.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005518.1:612643-613677:- | gene-YPR004C_Bruggeman | rna-NM_001184101.1_Bruggeman | cds-NP_015329.1_Bruggeman | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005534.1:655749-656783:- | gene-YPR004C_CAT1 | rna-NM_001184101.1_CAT1 | cds-NP_015329.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005374.1:539316-540349:- | gene-YPR004C_CBS1585 | rna-NM_001184101.1_CBS1585 | cds-NP_015329.1_CBS1585 | 99.3 | 99.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005358.1:553730-554764:- | gene-YPR004C_CBS436 | rna-NM_001184101.1_CBS436 | cds-NP_015329.1_CBS436 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005342.1:543065-544098:- | gene-YPR004C_CBS6412 | rna-NM_001184101.1_CBS6412 | cds-NP_015329.1_CBS6412 | 99.3 | 99.9 | Mismatch | 1 | 1 | 0 | False | False | False | True | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005326.1:535776-536809:- | gene-YPR004C_CBS6413 | rna-NM_001184101.1_CBS6413 | cds-NP_015329.1_CBS6413 | 99.3 | 99.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001537.1:563982-565016:- | gene-YPR004C_CENPK1137D | rna-NM_001184101.1_CENPK1137D | cds-NP_015329.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005486.1:533563-534596:- | gene-YPR004C_EthanolRed | rna-NM_001184101.1_EthanolRed | cds-NP_015329.1_EthanolRed | 99.4 | 99.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005550.1:541393-542426:- | gene-YPR004C_FaliES1 | rna-NM_001184101.1_FaliES1 | cds-NP_015329.1_FaliES1 | 99.4 | 99.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000337.1:3225-4259:- | gene-YPR004C_JAY291 | rna-NM_001184101.1_JAY291 | cds-NP_015329.1_JAY291 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005422.1:553854-554888:- | gene-YPR004C_MUCL30387 | rna-NM_001184101.1_MUCL30387 | cds-NP_015329.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005454.1:552956-553990:- | gene-YPR004C_MUCL30388 | rna-NM_001184101.1_MUCL30388 | cds-NP_015329.1_MUCL30388 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005294.1:532556-533589:- | gene-YPR004C_MUCL39482 | rna-NM_001184101.1_MUCL39482 | cds-NP_015329.1_MUCL39482 | 99.3 | 99.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005438.1:592739-593772:- | gene-YPR004C_MUCL42920 | rna-NM_001184101.1_MUCL42920 | cds-NP_015329.1_MUCL42920 | 99.8 | 99.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011825.1:563990-565024:- | gene-YPR004C_NCIM3186 | rna-NM_001184101.1_NCIM3186 | cds-NP_015329.1_NCIM3186 | 99.0 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005278.1:540255-541288:- | gene-YPR004C_NCYC1407 | rna-NM_001184101.1_NCYC1407 | cds-NP_015329.1_NCYC1407 | 99.3 | 99.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994155.1:547185-548219:- | gene-YPR004C_PE2H3 | rna-NM_001184101.1_PE2H3 | cds-NP_015329.1_PE2H3 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999887.1:546800-547834:- | gene-YPR004C_PE2H4 | rna-NM_001184101.1_PE2H4 | cds-NP_015329.1_PE2H4 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001148.4:564007-565041:- | gene-YPR004C_S288C | rna-NM_001184101.1_S288C | cds-NP_015329.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000026.1:135249-136283:+ | gene-YPR004C_SA1 | rna-NM_001184101.1_SA1 | cds-NP_015329.1_SA1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005502.1:541192-542225:- | gene-YPR004C_ThermosaccDry | rna-NM_001184101.1_ThermosaccDry | cds-NP_015329.1_ThermosaccDry | 99.3 | 99.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005470.1:557439-558473:- | gene-YPR004C_VR1 | rna-NM_001184101.1_VR1 | cds-NP_015329.1_VR1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000033.1:540497-541530:- | gene-YPR004C_ZTW1 | rna-NM_001184101.1_ZTW1 | cds-NP_015329.1_ZTW1 | 99.5 | 99.9 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047502.1:540100-541134:- | gene-YPR004C_Sparadoxus | rna-NM_001184101.1_Sparadoxus | cds-NP_015329.1_Sparadoxus | 90.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |