AIM39 (YOL053W)

Gene profile

Gene name: AIM39
Reference locus (S288C): YOL053W
Gene biotype: protein_coding

Description: Protein of unknown function; null mutant displays elevated frequency of mitochondrial genome loss; Belongs to the AIM39 family

Top 10 interactors (score): COR1 (0.432)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:214382-215569:+ gene-YOL053W_AKU4011 rna-NM_001183308.1_AKU4011 cds-NP_014588.1_AKU4011 98.8 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000152.1:30039-31226:+ gene-YOL053W_BG1 rna-NM_001183308.1_BG1 cds-NP_014588.1_BG1 98.7 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:217274-218461:+ gene-YOL053W_Bruggeman rna-NM_001183308.1_Bruggeman cds-NP_014588.1_Bruggeman 99.3 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:215213-216400:+ gene-YOL053W_CAT1 rna-NM_001183308.1_CAT1 cds-NP_014588.1_CAT1 99.0 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:209049-210236:+ gene-YOL053W_CBS1585 rna-NM_001183308.1_CBS1585 cds-NP_014588.1_CBS1585 98.9 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005357.1:213365-214552:+ gene-YOL053W_CBS436 rna-NM_001183308.1_CBS436 cds-NP_014588.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005341.1:208446-209633:+ gene-YOL053W_CBS6412 rna-NM_001183308.1_CBS6412 cds-NP_014588.1_CBS6412 98.9 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:215950-217137:+ gene-YOL053W_CBS6413 rna-NM_001183308.1_CBS6413 cds-NP_014588.1_CBS6413 98.9 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:229788-230975:+ gene-YOL053W_CENPK1137D rna-NM_001183308.1_CENPK1137D cds-NP_014588.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005485.1:211406-212593:+ gene-YOL053W_EthanolRed rna-NM_001183308.1_EthanolRed cds-NP_014588.1_EthanolRed 98.8 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:214322-215509:+ gene-YOL053W_FaliES1 rna-NM_001183308.1_FaliES1 cds-NP_014588.1_FaliES1 98.8 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000018.1:50948-52135:- gene-YOL053W_JAY291 rna-NM_001183308.1_JAY291 cds-NP_014588.1_JAY291 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:220046-221233:+ gene-YOL053W_MUCL30387 rna-NM_001183308.1_MUCL30387 cds-NP_014588.1_MUCL30387 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:224644-225831:+ gene-YOL053W_MUCL30388 rna-NM_001183308.1_MUCL30388 cds-NP_014588.1_MUCL30388 99.4 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:216567-217754:+ gene-YOL053W_MUCL39482 rna-NM_001183308.1_MUCL39482 cds-NP_014588.1_MUCL39482 98.9 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:231549-232736:+ gene-YOL053W_MUCL42920 rna-NM_001183308.1_MUCL42920 cds-NP_014588.1_MUCL42920 99.6 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:229974-231161:+ gene-YOL053W_NCIM3186 rna-NM_001183308.1_NCIM3186 cds-NP_014588.1_NCIM3186 98.7 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:223311-224498:+ gene-YOL053W_NCYC1407 rna-NM_001183308.1_NCYC1407 cds-NP_014588.1_NCYC1407 98.9 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:205733-206920:+ gene-YOL053W_PE2H3 rna-NM_001183308.1_PE2H3 cds-NP_014588.1_PE2H3 99.7 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:216707-217894:+ gene-YOL053W_PE2H4 rna-NM_001183308.1_PE2H4 cds-NP_014588.1_PE2H4 99.6 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:230085-231272:+ gene-YOL053W_S288C rna-NM_001183308.1_S288C cds-NP_014588.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000001.1:198057-199244:+ gene-YOL053W_SA1 rna-NM_001183308.1_SA1 cds-NP_014588.1_SA1 99.1 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:212893-214080:+ gene-YOL053W_ThermosaccDry rna-NM_001183308.1_ThermosaccDry cds-NP_014588.1_ThermosaccDry 98.8 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:212956-214143:+ gene-YOL053W_VR1 rna-NM_001183308.1_VR1 cds-NP_014588.1_VR1 98.8 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000031.1:212768-213955:+ gene-YOL053W_ZTW1 rna-NM_001183308.1_ZTW1 cds-NP_014588.1_ZTW1 98.8 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:221111-222298:+ gene-YOL053W_Sparadoxus rna-NM_001183308.1_Sparadoxus cds-NP_014588.1_Sparadoxus 88.1 99.7 Unannotated 1 1 0 False False False False True

Additional files